Detailed information NTG0685948

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ORI30_RS14225
• Genome accession: NZ_CP110996
• Coordinates: 2942245..2943270 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain XYEH3783
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2937245..2948270

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ORI30_RS14195 (ORI30_14195)	zapB	2937329..2937574 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ORI30_RS14200 (ORI30_14200)	rraA	2937659..2938144 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ORI30_RS14205 (ORI30_14205)	menA	2938237..2939163 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ORI30_RS14210 (ORI30_14210)	hslU	2939230..2940561 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ORI30_RS14215 (ORI30_14215)	hslV	2940571..2941101 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ORI30_RS14220 (ORI30_14220)	ftsN	2941194..2942153 (-)	960	WP_000068847.1	cell division protein FtsN	-
ORI30_RS14225 (ORI30_14225)	cytR	2942245..2943270 (-)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
ORI30_RS14230 (ORI30_14230)	priA	2943426..2945624 (-)	2199	WP_001540348.1	primosomal protein N'	Machinery gene
ORI30_RS14235 (ORI30_14235)	rpmE	2945827..2946039 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ORI30_RS14240 (ORI30_14240)	yiiX	2946100..2946708 (-)	609	WP_000702298.1	YiiX family permuted papain-like enzyme	-
ORI30_RS14245 (ORI30_14245)	metJ	2946768..2947085 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=685948 ORI30_RS14225 WP_000644911.1 2942245..2943270(-) (cytR) [Escherichia coli strain XYEH3783]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=685948 ORI30_RS14225 WP_000644911.1 2942245..2943270(-) (cytR) [Escherichia coli strain XYEH3783]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625