Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   M2M22_RS19740 Genome accession   NZ_CP096923
Coordinates   4120894..4121520 (+) Length   208 a.a.
NCBI ID   WP_023299743.1    Uniprot ID   A0A9X7L0J6
Organism   Enterobacter hormaechei strain NY0401     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 4115894..4126520
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M2M22_RS19720 (M2M22_19710) - 4116293..4118053 (-) 1761 WP_023305819.1 AAA family ATPase -
  M2M22_RS19725 (M2M22_19715) matP 4118240..4118692 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  M2M22_RS19730 (M2M22_19720) ompA 4118758..4119810 (-) 1053 WP_017694761.1 porin OmpA -
  M2M22_RS19735 (M2M22_19725) sulA 4120167..4120676 (-) 510 WP_063146213.1 SOS-induced cell division inhibitor SulA -
  M2M22_RS19740 (M2M22_19730) sxy/tfoX 4120894..4121520 (+) 627 WP_023299743.1 TfoX/Sxy family DNA transformation protein Regulator
  M2M22_RS19745 (M2M22_19735) yccS 4121477..4123639 (-) 2163 WP_023299744.1 YccS family putative transporter -
  M2M22_RS19750 (M2M22_19740) - 4123658..4124104 (-) 447 Protein_3848 YccF domain-containing protein -
  M2M22_RS19755 (M2M22_19745) helD 4124227..4126281 (+) 2055 WP_206227115.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.54 Da        Isoelectric Point: 9.4592

>NTDB_id=685233 M2M22_RS19740 WP_023299743.1 4120894..4121520(+) (sxy/tfoX) [Enterobacter hormaechei strain NY0401]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=685233 M2M22_RS19740 WP_023299743.1 4120894..4121520(+) (sxy/tfoX) [Enterobacter hormaechei strain NY0401]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCTTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACTAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572