Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   OOZ27_RS19860 Genome accession   NZ_CP110634
Coordinates   3723484..3724197 (-) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis strain MG-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3718484..3729197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OOZ27_RS19840 (OOZ27_19840) ghrB 3718629..3719606 (+) 978 WP_074794322.1 2-hydroxyacid dehydrogenase -
  OOZ27_RS19845 (OOZ27_19845) psdB 3719643..3721583 (-) 1941 WP_015714768.1 lantibiotic ABC transporter permease PsdB -
  OOZ27_RS19850 (OOZ27_19850) psdA 3721558..3722337 (-) 780 WP_015714769.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  OOZ27_RS19855 (OOZ27_19855) psdS 3722420..3723490 (-) 1071 WP_015714770.1 two-component sensor histidine kinase PsdS -
  OOZ27_RS19860 (OOZ27_19860) braR 3723484..3724197 (-) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  OOZ27_RS19865 (OOZ27_19865) - 3724344..3724553 (+) 210 WP_014665489.1 hypothetical protein -
  OOZ27_RS19870 (OOZ27_19870) yvcN 3724589..3725353 (-) 765 WP_015714771.1 arylamine N-acetyltransferase family protein -
  OOZ27_RS19875 (OOZ27_19875) crh 3725354..3725611 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  OOZ27_RS19880 (OOZ27_19880) whiA 3725635..3726585 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  OOZ27_RS19885 (OOZ27_19885) mgfK 3726608..3727561 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  OOZ27_RS19890 (OOZ27_19890) rapZ 3727563..3728450 (-) 888 WP_003243903.1 RNase adapter RapZ -
  OOZ27_RS19895 (OOZ27_19895) rppI 3728475..3728951 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=685174 OOZ27_RS19860 WP_003244535.1 3723484..3724197(-) (braR) [Bacillus subtilis strain MG-1]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=685174 OOZ27_RS19860 WP_003244535.1 3723484..3724197(-) (braR) [Bacillus subtilis strain MG-1]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGTAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43