Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   OOZ27_RS17240 Genome accession   NZ_CP110634
Coordinates   3224063..3224758 (-) Length   231 a.a.
NCBI ID   WP_015714560.1    Uniprot ID   -
Organism   Bacillus subtilis strain MG-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3219063..3229758
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OOZ27_RS17220 (OOZ27_17220) yttA 3219490..3220236 (+) 747 WP_015714557.1 LMBR1 domain-containing protein -
  OOZ27_RS17225 (OOZ27_17225) bceB 3220273..3222213 (-) 1941 WP_015714558.1 bacitracin ABC transporter permease BceB -
  OOZ27_RS17230 (OOZ27_17230) bceA 3222203..3222964 (-) 762 WP_015714559.1 bacitracin ABC transporter ATP-binding protein BceA -
  OOZ27_RS17235 (OOZ27_17235) bceS 3223066..3224070 (-) 1005 WP_003229135.1 two-component sensor histidine kinase BceS -
  OOZ27_RS17240 (OOZ27_17240) braR 3224063..3224758 (-) 696 WP_015714560.1 two-component response regulator BceR Regulator
  OOZ27_RS17245 (OOZ27_17245) ytrF 3224855..3226165 (-) 1311 WP_015714561.1 ABC transporter permease YtrF -
  OOZ27_RS17250 (OOZ27_17250) ytrE 3226155..3226850 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  OOZ27_RS17255 (OOZ27_17255) ytrD 3226865..3227842 (-) 978 WP_015714562.1 ABC transporter permease YtrD -
  OOZ27_RS17260 (OOZ27_17260) ytrC 3227872..3228858 (-) 987 WP_015714563.1 ABC transporter permease YtrC -
  OOZ27_RS17265 (OOZ27_17265) ytrB 3228852..3229730 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26937.82 Da        Isoelectric Point: 5.3819

>NTDB_id=685164 OOZ27_RS17240 WP_015714560.1 3224063..3224758(-) (braR) [Bacillus subtilis strain MG-1]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNEKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLEVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=685164 OOZ27_RS17240 WP_015714560.1 3224063..3224758(-) (braR) [Bacillus subtilis strain MG-1]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGAAAAAGGATCTGTTGAACTGACCAAAAATGAGATGTTCATT
CTTAAACAACTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGAGGTCCTGCAGCTAGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377