Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   M2J84_RS15340 Genome accession   NZ_CP096918
Coordinates   3236962..3237348 (-) Length   128 a.a.
NCBI ID   WP_043380869.1    Uniprot ID   A0A014QCC5
Organism   Comamonas aquatica strain NY8661     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3231962..3242348
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M2J84_RS15325 (M2J84_15335) - 3233740..3235974 (-) 2235 WP_270149032.1 methyl-accepting chemotaxis protein -
  M2J84_RS15330 (M2J84_15340) - 3235999..3236541 (-) 543 WP_270149034.1 chemotaxis protein CheW -
  M2J84_RS15335 (M2J84_15345) - 3236553..3236924 (-) 372 WP_042415197.1 response regulator transcription factor -
  M2J84_RS15340 (M2J84_15350) pilG 3236962..3237348 (-) 387 WP_043380869.1 response regulator Regulator
  M2J84_RS15345 (M2J84_15355) - 3237408..3237560 (-) 153 WP_042415201.1 rubredoxin -
  M2J84_RS15350 (M2J84_15360) thiD 3237672..3238661 (+) 990 WP_045266248.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  M2J84_RS15355 (M2J84_15365) hemL 3238645..3239949 (+) 1305 WP_270149038.1 glutamate-1-semialdehyde 2,1-aminomutase -
  M2J84_RS15360 (M2J84_15370) - 3240008..3240613 (-) 606 WP_210929454.1 DNA-3-methyladenine glycosylase I -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14202.35 Da        Isoelectric Point: 7.1061

>NTDB_id=685156 M2J84_RS15340 WP_043380869.1 3236962..3237348(-) (pilG) [Comamonas aquatica strain NY8661]
MSAANASFKVLVVDDSNTIRRSAEIFLKQGGHEVLLAEDGFDALAKVNDFQPQLIFCDILMPKLDGYQTCAIIKRNAHFS
DTPIVMLSSKDGVFDKARGRMVGCQEYLTKPFSKDQLLQAVQQFGRTA

Nucleotide


Download         Length: 387 bp        

>NTDB_id=685156 M2J84_RS15340 WP_043380869.1 3236962..3237348(-) (pilG) [Comamonas aquatica strain NY8661]
TTGAGTGCAGCAAACGCATCGTTCAAGGTGCTGGTTGTCGATGACAGCAATACGATCCGCCGCAGTGCCGAGATCTTCCT
CAAGCAAGGGGGGCACGAGGTGCTCCTGGCTGAGGATGGCTTCGATGCGCTGGCCAAGGTCAACGACTTTCAGCCGCAGC
TGATTTTTTGCGACATCCTGATGCCCAAGCTGGATGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCCCATTTTTCG
GACACGCCGATCGTGATGCTGTCTTCCAAGGACGGCGTCTTCGACAAGGCCCGCGGCAGGATGGTGGGGTGCCAGGAATA
CCTCACCAAGCCGTTCTCCAAGGATCAGTTGCTGCAGGCTGTGCAACAGTTCGGACGCACCGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A014QCC5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

56.098

96.094

0.539