Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   OOZ27_RS06100 Genome accession   NZ_CP110634
Coordinates   1126777..1127520 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain MG-1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1121777..1132520
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OOZ27_RS06065 (OOZ27_06065) yhaI 1122105..1122446 (+) 342 WP_009966921.1 YhaI family protein -
  OOZ27_RS06070 (OOZ27_06070) scoC 1122443..1123054 (-) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  OOZ27_RS06075 (OOZ27_06075) yhaH 1123232..1123588 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  OOZ27_RS06080 (OOZ27_06080) - 1123718..1123909 (+) 192 WP_014476318.1 hypothetical protein -
  OOZ27_RS06085 (OOZ27_06085) trpP 1123983..1124501 (-) 519 WP_015715602.1 tryptophan transporter TrpP -
  OOZ27_RS06090 (OOZ27_06090) serC 1124626..1125705 (-) 1080 WP_015715603.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  OOZ27_RS06095 (OOZ27_06095) hinT 1125852..1126289 (-) 438 WP_003233231.1 HIT family protein -
  OOZ27_RS06100 (OOZ27_06100) pptA 1126777..1127520 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  OOZ27_RS06105 (OOZ27_06105) ecsB 1127513..1128739 (+) 1227 WP_049140674.1 ABC transporter permease EcsB -
  OOZ27_RS06110 (OOZ27_06110) ecsC 1128759..1129469 (+) 711 WP_049140675.1 EcsC family protein -
  OOZ27_RS06115 (OOZ27_06115) sndC 1129487..1130677 (-) 1191 WP_064911664.1 N-acetyl amino acid acetylase SndC -
  OOZ27_RS06120 (OOZ27_06120) - 1130749..1132140 (-) 1392 WP_072692642.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=685079 OOZ27_RS06100 WP_003233230.1 1126777..1127520(+) (pptA) [Bacillus subtilis strain MG-1]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=685079 OOZ27_RS06100 WP_003233230.1 1126777..1127520(+) (pptA) [Bacillus subtilis strain MG-1]
ATGTCTCTGCTATCGGTAAAAGACTTAACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTGATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACATATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTTTTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAGCGGATGAATGAAGCGAAAAAGGGCGGGGCGAGCGT
GCTGATGTCAACGCACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547