Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OMP06_RS13520 Genome accession   NZ_CP110462
Coordinates   2808785..2809726 (-) Length   313 a.a.
NCBI ID   WP_001210791.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain RBH2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2803785..2814726
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OMP06_RS13505 (OMP06_13505) bauB 2806096..2807064 (-) 969 WP_001104128.1 siderophore-binding periplasmic lipoprotein BauB -
  OMP06_RS13510 (OMP06_13510) bauE 2807071..2807841 (-) 771 WP_000582117.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  OMP06_RS13515 (OMP06_13515) bauC 2807838..2808785 (-) 948 WP_065087321.1 ferric acinetobactin ABC transporter permease subunit BauC -
  OMP06_RS13520 (OMP06_13520) ceuB 2808785..2809726 (-) 942 WP_001210791.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  OMP06_RS13525 (OMP06_13525) basB 2810358..2812388 (+) 2031 WP_265168101.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  OMP06_RS13530 (OMP06_13530) basA 2812459..2814306 (-) 1848 WP_265167572.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34007.08 Da        Isoelectric Point: 8.6941

>NTDB_id=684932 OMP06_RS13520 WP_001210791.1 2808785..2809726(-) (ceuB) [Acinetobacter baumannii strain RBH2]
MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=684932 OMP06_RS13520 WP_001210791.1 2808785..2809726(-) (ceuB) [Acinetobacter baumannii strain RBH2]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGTCGTATTCCTCGTTTAATTACCATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACACTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGGCGGATCCGTTTTAGAAATACGGTTTTAG
TACCTGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACCGCTTTACCGTGATTGGTATGGGGGAAGAGATGGCTTCTAGCTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGATACTGGTTGCTATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGTCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTGGGTGGGGCGTCTCTATTACTGATTTGCGACATTCTTGGCCGCTCGATTATTTACCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419