Detailed information NTG0684888

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: EFK13_RS13010
• Genome accession: NZ_CP096889
• Coordinates: 2554922..2557252 (-)
• Length: 776 a.a.
• NCBI ID: WP_129508240.1
• Uniprot ID: -
• Organism: Bacillus cabrialesii strain TE3
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2549922..2562252

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EFK13_RS12975 (EFK13_12975)	-	2550261..2550599 (-)	339	WP_129508241.1	YqxA family protein	-
EFK13_RS12980 (EFK13_12980)	spoIIP	2550616..2551821 (-)	1206	WP_129508203.1	spore autolysin SpoIIP	-
EFK13_RS12985 (EFK13_12985)	gpr	2551884..2552990 (-)	1107	WP_075747360.1	GPR endopeptidase	-
EFK13_RS12990 (EFK13_12990)	rpsT	2553193..2553459 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
EFK13_RS12995 (EFK13_12995)	holA	2553474..2554517 (-)	1044	WP_129508202.1	DNA polymerase III subunit delta	-
EFK13_RS13000 (EFK13_13000)	-	2554557..2554706 (-)	150	WP_129508201.1	hypothetical protein	-
EFK13_RS13005 (EFK13_13005)	-	2554747..2554881 (+)	135	WP_003229983.1	YqzM family protein	-
EFK13_RS13010 (EFK13_13010)	comEC	2554922..2557252 (-)	2331	WP_129508240.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
EFK13_RS13015 (EFK13_13015)	-	2557256..2557825 (-)	570	WP_003237106.1	ComE operon protein 2	-
EFK13_RS13020 (EFK13_13020)	-	2557893..2558509 (-)	617	Protein_2520	helix-hairpin-helix domain-containing protein	-
EFK13_RS13025 (EFK13_13025)	comER	2558593..2559414 (+)	822	WP_129508200.1	late competence protein ComER	-
EFK13_RS13030 (EFK13_13030)	-	2559479..2560222 (-)	744	WP_129508199.1	class I SAM-dependent methyltransferase	-
EFK13_RS13035 (EFK13_13035)	rsfS	2560219..2560575 (-)	357	WP_064814281.1	ribosome silencing factor	-
EFK13_RS13040 (EFK13_13040)	yqeK	2560593..2561153 (-)	561	WP_129508198.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
EFK13_RS13045 (EFK13_13045)	-	2561143..2561712 (-)	570	WP_129508197.1	nicotinate-nucleotide adenylyltransferase	-
EFK13_RS13050 (EFK13_13050)	yhbY	2561724..2562014 (-)	291	WP_129508196.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86495.82 Da
• Isoelectric Point: 8.0948

>NTDB_id=684888 EFK13_RS13010 WP_129508240.1 2554922..2557252(-) (comEC) [Bacillus cabrialesii strain TE3]
MRNSRLLLPLAAASATAGITAAAYFSAVFLFFLFLLIIFIKTRHGSLFLVCFFSFVLFFALYTVTDSRNVSSYQQGTYQF
KAVINSIPKIDGDRMSMVVKTPDGEKWAASHRIQSADEKDRLSYIEPGMSCQLTGSLEEPKHATVPGTFDYHEYLYRQHI
HWNYSVTSIANCSGPANFRHKLLSLRKYIVSFTNGLLPPDTAGIVQALTVGDRFYVEDEVLNAYQKLGVVHLLAISGLHV
GILTAGLFYIMIRLGITREKASILLLLLLPLYVMVTGAAPSVLRAALMSGIYLAGSLVKWRIHSTGAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFRQAKTSLGQLTMVSMIAQLGSLPILLYHFQQFSMISIPMNMVLVPFYTFCVLPGA
IAGVFLLSLSASAGRLFFSWFDFLMSWTNTLITKIAEIDVFTIIIARPEPALLFLFTVTIILLLLAIEKRSFSQLMVTGC
ICCAALCLLFVYPRLSSEGEVDMIDIGQGDSMYVGAPHQRGHVLIDTGGTLSYSSEPWREKHHPFSLGEKVLIPFLTAKG
VKQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLRAAREEGVTIEEVKRGDVLQIKDLQFQVLSPE
TPDPASKNNSSLVLWMKMGGMSWILTGDLEKEGEQEVMNVFPHIKADVLKVGHHGSKGSTGEEFIKQLQPKTAIISAGEN
NRYHHPHQEVLDILQRHSIRVLRTDQSGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=684888 EFK13_RS13010 WP_129508240.1 2554922..2557252(-) (comEC) [Bacillus cabrialesii strain TE3]
ATGCGTAATTCGCGTTTGTTATTGCCTTTGGCGGCAGCTTCAGCAACGGCTGGAATTACTGCCGCCGCTTATTTCTCCGC
TGTTTTTCTTTTCTTCCTCTTTCTCCTCATCATTTTCATCAAAACGAGACACGGTTCTCTCTTTTTGGTTTGTTTCTTCT
CTTTTGTATTGTTTTTTGCGCTGTATACGGTCACAGATTCCCGGAATGTCTCTTCATATCAGCAGGGCACCTATCAATTC
AAGGCAGTGATTAACAGTATTCCTAAAATTGACGGAGACCGTATGTCTATGGTGGTTAAGACGCCTGATGGCGAAAAATG
GGCCGCTTCACATCGCATTCAGTCTGCTGATGAAAAAGATCGGCTGTCATACATAGAACCAGGAATGTCATGTCAATTGA
CTGGTTCATTGGAAGAGCCTAAACACGCAACTGTGCCGGGCACATTTGATTATCATGAGTATCTTTACCGGCAGCATATT
CATTGGAACTATTCTGTTACATCTATCGCAAATTGCAGCGGACCTGCAAATTTCAGGCATAAGCTGCTCAGTTTGAGAAA
ATACATCGTATCATTCACAAACGGCCTGCTGCCTCCTGATACGGCAGGAATCGTACAAGCACTTACAGTCGGTGACCGAT
TTTATGTGGAGGACGAAGTGCTTAACGCGTATCAAAAGCTTGGTGTCGTCCATCTCTTGGCGATTTCAGGACTCCACGTC
GGCATTTTGACAGCCGGATTGTTTTATATCATGATCCGTCTAGGGATAACAAGAGAAAAGGCGTCAATCCTATTGCTGTT
ATTACTGCCGCTCTATGTAATGGTGACAGGCGCAGCTCCTTCGGTGCTTCGCGCTGCCTTGATGTCGGGTATTTACTTAG
CTGGAAGTCTCGTTAAATGGCGGATACATTCAACTGGTGCAATCTGTCTTTCATACATCGTCCTCTTGCTCTTCAATCCT
TATCATCTCTTTGAGGCCGGTTTCCAGCTGTCATTCGCCGTCAGTTTTTCTTTAATTCTTTCCTCTTCTATTTTCCGGCA
AGCAAAAACCTCCCTGGGCCAGCTGACAATGGTATCGATGATCGCTCAGCTGGGCTCACTTCCTATTCTCCTGTATCATT
TCCAGCAGTTTTCTATGATTAGTATACCGATGAACATGGTGCTGGTTCCTTTTTATACATTCTGTGTTTTGCCGGGGGCT
ATAGCAGGTGTTTTTCTATTAAGCCTTTCTGCTTCGGCTGGTCGATTGTTCTTCAGCTGGTTTGATTTTTTGATGAGCTG
GACCAACACGCTGATCACAAAAATTGCAGAGATTGATGTATTCACGATCATCATTGCGCGTCCTGAACCTGCTCTGCTCT
TTTTATTCACAGTCACGATTATCTTATTACTTCTGGCGATTGAAAAACGCTCCTTCTCGCAGCTGATGGTAACTGGCTGC
ATTTGCTGCGCGGCGCTTTGTCTTCTCTTTGTATATCCGCGTCTTAGTTCCGAAGGAGAAGTGGATATGATTGATATTGG
GCAAGGTGACAGCATGTATGTAGGTGCACCGCATCAGCGGGGGCATGTCTTAATTGATACTGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGGGAAAAACACCATCCGTTTTCACTGGGGGAAAAGGTGCTGATCCCGTTTTTAACTGCTAAGGGA
GTCAAACAGCTTGATGCTTTGATTTTGACGCACGCTGACCAAGATCATATAGGAGAGGCGGAGACTCTGCTGAAGCATCA
TAAAGTGAAGCGCCTCGTGATTCCAAAAGGGTTCGTTTCTGAACCTAAAGACGAGAAAGTGCTGCGGGCAGCCAGAGAAG
AGGGCGTGACAATAGAGGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTTCAAGTACTGTCACCGGAA
ACACCTGATCCGGCAAGCAAAAATAATTCTTCTCTCGTTCTGTGGATGAAAATGGGCGGTATGAGCTGGATCTTGACGGG
TGATCTGGAGAAAGAAGGAGAACAGGAGGTAATGAATGTATTTCCGCATATAAAAGCAGACGTGTTAAAGGTGGGGCACC
ATGGAAGCAAAGGCTCTACTGGTGAAGAATTTATCAAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCGGGAGAAAAC
AATCGGTACCATCACCCGCATCAAGAAGTTCTGGACATATTACAGAGACATTCCATCCGCGTTCTGCGCACGGATCAAAG
CGGAACAATCCAATATAGATATAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-469)

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

• Domain of unknown function (DUF4131) (DUF4131) (20-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	87.113	100	0.871