Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EFK13_RS07810 Genome accession   NZ_CP096889
Coordinates   1505361..1505825 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus cabrialesii strain TE3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1500361..1510825
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EFK13_RS07790 (EFK13_07790) kinA 1500825..1502645 (+) 1821 WP_129505872.1 sporulation histidine kinase KinA -
  EFK13_RS07795 (EFK13_07795) - 1502655..1503836 (-) 1182 WP_129505871.1 aminotransferase A -
  EFK13_RS07800 (EFK13_07800) - 1504038..1504199 (-) 162 WP_003238943.1 hypothetical protein -
  EFK13_RS07805 (EFK13_07805) cheV 1504406..1505317 (+) 912 WP_129505870.1 chemotaxis protein CheV -
  EFK13_RS07810 (EFK13_07810) kre 1505361..1505825 (-) 465 WP_003232406.1 YkyB family protein Regulator
  EFK13_RS07815 (EFK13_07815) - 1505951..1507243 (-) 1293 WP_129505869.1 MFS transporter -
  EFK13_RS07820 (EFK13_07820) - 1507319..1507813 (-) 495 WP_129505916.1 L,D-transpeptidase family protein -
  EFK13_RS07825 (EFK13_07825) - 1507871..1508731 (-) 861 WP_129505868.1 metallophosphoesterase -
  EFK13_RS07830 (EFK13_07830) fadH 1508871..1509635 (+) 765 WP_129505867.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=684868 EFK13_RS07810 WP_003232406.1 1505361..1505825(-) (kre) [Bacillus cabrialesii strain TE3]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=684868 EFK13_RS07810 WP_003232406.1 1505361..1505825(-) (kre) [Bacillus cabrialesii strain TE3]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTTAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCAAAACACCTATTGCAAGAATACGTCGGCATGAAAGAAAAGCCGCTTGTGC
CAAATCGCCAGCAGCCAGCTTATCATAAACCTGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1