Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   LFL98_RS09720 Genome accession   NZ_CP110365
Coordinates   1904292..1904909 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain HY2-62     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1899292..1909909
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LFL98_RS09690 (LFL98_09695) yndJ 1899623..1901263 (+) 1641 WP_277737175.1 YndJ family protein -
  LFL98_RS09695 (LFL98_09700) - 1901341..1901655 (+) 315 WP_026113726.1 hypothetical protein -
  LFL98_RS09700 (LFL98_09705) pghL 1901880..1902638 (+) 759 WP_024573198.1 gamma-polyglutamate hydrolase PghL -
  LFL98_RS09705 (LFL98_09710) - 1902665..1903114 (-) 450 WP_003245454.1 YndM family protein -
  LFL98_RS09710 (LFL98_09715) fosM 1903323..1903742 (+) 420 WP_014479937.1 FosM family fosfomycin resistance protein -
  LFL98_RS09715 (LFL98_09720) - 1903666..1904005 (+) 340 Protein_1856 hypothetical protein -
  LFL98_RS09720 (LFL98_09725) dinR/lexA 1904292..1904909 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  LFL98_RS09725 (LFL98_09730) yneA 1905059..1905376 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  LFL98_RS09730 (LFL98_09735) dinL 1905395..1906048 (+) 654 WP_015714011.1 recombinase family protein -
  LFL98_RS09735 (LFL98_09740) ynzC 1906112..1906345 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  LFL98_RS09740 (LFL98_09745) recP/tkt 1906514..1908517 (+) 2004 WP_014476936.1 transketolase Machinery gene
  LFL98_RS09745 (LFL98_09750) sirA 1908670..1909116 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  LFL98_RS09750 (LFL98_09755) yneF 1909202..1909420 (+) 219 WP_003221221.1 YneF family protein -
  LFL98_RS09755 (LFL98_09760) ynzD 1909494..1909667 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=684711 LFL98_RS09720 WP_003238209.1 1904292..1904909(-) (dinR/lexA) [Bacillus subtilis strain HY2-62]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=684711 LFL98_RS09720 WP_003238209.1 1904292..1904909(-) (dinR/lexA) [Bacillus subtilis strain HY2-62]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTAGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1