Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   M2B19_RS09910 Genome accession   NZ_CP096849
Coordinates   2035115..2035741 (-) Length   208 a.a.
NCBI ID   WP_032637053.1    Uniprot ID   A0AAJ6MNH4
Organism   Enterobacter kobei strain EC1382     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2030115..2040741
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M2B19_RS09895 (M2B19_09895) helD 2030352..2032406 (-) 2055 WP_045281285.1 DNA helicase IV -
  M2B19_RS09900 (M2B19_09900) - 2032530..2032976 (+) 447 WP_014883256.1 YccF domain-containing protein -
  M2B19_RS09905 (M2B19_09905) yccS 2032996..2035158 (+) 2163 WP_023332614.1 YccS family putative transporter -
  M2B19_RS09910 (M2B19_09910) sxy/tfoX 2035115..2035741 (-) 627 WP_032637053.1 TfoX/Sxy family DNA transformation protein Regulator
  M2B19_RS09915 (M2B19_09915) sulA 2035959..2036468 (+) 510 WP_014883253.1 SOS-induced cell division inhibitor SulA -
  M2B19_RS09920 (M2B19_09920) ompA 2036824..2037879 (+) 1056 WP_014883252.1 porin OmpA -
  M2B19_RS09925 (M2B19_09925) matP 2037944..2038396 (-) 453 WP_023332611.1 macrodomain Ter protein MatP -
  M2B19_RS09930 (M2B19_09930) - 2038583..2040343 (+) 1761 WP_014883250.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23930.53 Da        Isoelectric Point: 9.0691

>NTDB_id=684691 M2B19_RS09910 WP_032637053.1 2035115..2035741(-) (sxy/tfoX) [Enterobacter kobei strain EC1382]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAIDDAVFAMVSDGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERCQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARECWLKMRAKN
RALGIKVLFALEGAIEGLHEAALPAGTRRELTEWFNALPEPQKNHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=684691 M2B19_RS09910 WP_032637053.1 2035115..2035741(-) (sxy/tfoX) [Enterobacter kobei strain EC1382]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCCCAGGAATACCTCTCACCGCTAGGAGAAATTCATCATCGCGCACT
GTTCGGTGGCTATACCCTGGCGATAGATGACGCGGTTTTTGCCATGGTGTCAGATGGCGAGCTGTACCTTCGCGCCTGTG
AAGAAAGCGCGAAATACTGTGTAAAAAATGCCGCCTCCTTTTTGACGCTGATGAAACGAGGCCGCCCGGTACTTCTCAAC
TATTACCGTGTCGATGATGGACTGTGGCAAGACAGGGAACGGCTGCTTCAGCTCTCCTCTTTCGCGCTCAATGCGGCGAG
GAAAGAGCGCTGTCAGCGCCATCAACGAAACCGGCTTAAAGATCTGCCAAACCTGACCTTTCAGCTTGAGGTATTACTTT
TTGAAGCTGGCATTACTAACGAAGAGACGCTGCGGGCACTGGGTGCCAGGGAGTGCTGGTTAAAGATGCGGGCTAAAAAT
AGGGCACTCGGTATTAAAGTGCTCTTCGCCCTTGAGGGGGCTATTGAGGGTTTGCATGAGGCGGCACTCCCGGCAGGCAC
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGAAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

57.143

97.596

0.558