Detailed information NTG0684646

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: LFL98_RS01630
• Genome accession: NZ_CP110365
• Coordinates: 295023..296144 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain HY2-62
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 290023..301144

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LFL98_RS01605 (LFL98_01605)	ycdA	290031..291095 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
LFL98_RS01610 (LFL98_01610)	-	291118..291249 (-)	132	WP_003246334.1	hypothetical protein	-
LFL98_RS01615 (LFL98_01615)	ycdB	291423..292841 (+)	1419	WP_277736893.1	YcdB/YcdC domain-containing protein	-
LFL98_RS01620 (LFL98_01620)	ycdC	293028..294389 (+)	1362	WP_277736894.1	YcdB/YcdC domain-containing protein	-
LFL98_RS01625 (LFL98_01625)	cwlK	294397..294900 (-)	504	WP_277736895.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
LFL98_RS01630 (LFL98_01630)	rapF	295023..296144 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
LFL98_RS01635 (LFL98_01635)	ycdF	296251..297027 (+)	777	WP_119898971.1	SDR family oxidoreductase	-
LFL98_RS01640 (LFL98_01640)	ycdG	297052..298737 (+)	1686	WP_128992375.1	alpha-glucosidase	-
LFL98_RS01645 (LFL98_01645)	znuA	298924..299883 (+)	960	WP_069322344.1	metal ABC transporter substrate-binding protein	-
LFL98_RS01650 (LFL98_01650)	znuC	299938..300633 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=684646 LFL98_RS01630 WP_015715201.1 295023..296144(+) (rapF) [Bacillus subtilis strain HY2-62]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=684646 LFL98_RS01630 WP_015715201.1 295023..296144(+) (rapF) [Bacillus subtilis strain HY2-62]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAGAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACTGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAACT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCTGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405