Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   M1C60_RS20985 Genome accession   NZ_CP096824
Coordinates   4008955..4009749 (-) Length   264 a.a.
NCBI ID   WP_038414961.1    Uniprot ID   -
Organism   Bacillus anthracis strain CVCC40202     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4003955..4014749
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M1C60_RS20965 (M1C60_20920) - 4005756..4005989 (+) 234 WP_001190187.1 DUF2627 domain-containing protein -
  M1C60_RS20970 (M1C60_20925) - 4006038..4006766 (-) 729 WP_000172562.1 glycerophosphodiester phosphodiesterase -
  M1C60_RS20975 (M1C60_20930) - 4006817..4006963 (+) 147 WP_001247671.1 YycC family protein -
  M1C60_RS20980 (M1C60_20935) - 4007131..4008657 (-) 1527 WP_000218387.1 glycosyltransferase family 39 protein -
  M1C60_RS20985 (M1C60_20940) spo0A 4008955..4009749 (-) 795 WP_038414961.1 sporulation transcription factor Spo0A Regulator
  M1C60_RS20990 (M1C60_20945) spoIVB 4010037..4011335 (-) 1299 WP_002037056.1 SpoIVB peptidase -
  M1C60_RS20995 (M1C60_20950) recN 4011454..4013193 (-) 1740 WP_000947756.1 DNA repair protein RecN Machinery gene
  M1C60_RS21000 (M1C60_20955) argR 4013461..4013910 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29465.17 Da        Isoelectric Point: 7.9362

>NTDB_id=684527 M1C60_RS20985 WP_038414961.1 4008955..4009749(-) (spo0A) [Bacillus anthracis strain CVCC40202]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYRYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=684527 M1C60_RS20985 WP_038414961.1 4008955..4009749(-) (spo0A) [Bacillus anthracis strain CVCC40202]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTCG
TATTGGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAAAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCAAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAATTTAGACGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACAGGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGCGTTGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCCGAGTTTATTGCAATGGTTGCGGATAAGCTTAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818