Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   M1R63_RS08175 Genome accession   NZ_CP096814
Coordinates   1698504..1699100 (+) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain Mu1413     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1693504..1704100
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M1R63_RS08155 (M1R63_08145) - 1693696..1695453 (-) 1758 WP_032408789.1 Lon protease family protein -
  M1R63_RS08160 (M1R63_08150) matP 1695639..1696091 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  M1R63_RS08165 (M1R63_08155) ompA 1696223..1697293 (-) 1071 WP_002898408.1 porin OmpA -
  M1R63_RS08170 (M1R63_08160) sulA 1697646..1698155 (-) 510 WP_004893150.1 SOS-induced cell division inhibitor SulA -
  M1R63_RS08175 (M1R63_08165) sxy/tfoX 1698504..1699100 (+) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  M1R63_RS08180 (M1R63_08170) yccS 1699114..1701249 (-) 2136 WP_004147856.1 YccS family putative transporter -
  M1R63_RS08185 (M1R63_08175) - 1701267..1701713 (-) 447 WP_002898425.1 YccF domain-containing protein -
  M1R63_RS08190 (M1R63_08180) helD 1701838..1703892 (+) 2055 WP_020324408.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=684379 M1R63_RS08175 WP_004179217.1 1698504..1699100(+) (sxy/tfoX) [Klebsiella pneumoniae strain Mu1413]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=684379 M1R63_RS08175 WP_004179217.1 1698504..1699100(+) (sxy/tfoX) [Klebsiella pneumoniae strain Mu1413]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51