Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   CTB89_RS10440 Genome accession   NZ_AP017891
Coordinates   2062303..2063346 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain GN3     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2057303..2068346
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CTB89_RS10410 - 2057724..2058980 (-) 1257 WP_078066285.1 aminopeptidase -
  CTB89_RS10415 - 2058983..2059183 (-) 201 WP_000180460.1 DUF1128 family protein -
  CTB89_RS10420 - 2059330..2059794 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  CTB89_RS10425 - 2059801..2060076 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  CTB89_RS10430 - 2060354..2061571 (+) 1218 WP_000037087.1 YihY/virulence factor BrkB family protein -
  CTB89_RS10435 vraR 2061684..2062313 (-) 630 WP_000153526.1 two-component system response regulator VraR Regulator
  CTB89_RS10440 vraS 2062303..2063346 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  CTB89_RS10445 liaF 2063343..2064044 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  CTB89_RS10450 - 2064059..2064445 (-) 387 WP_001110179.1 hypothetical protein -
  CTB89_RS10455 map 2064662..2065420 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  CTB89_RS10460 - 2065890..2066876 (+) 987 WP_000999715.1 aromatic acid exporter family protein -
  CTB89_RS10465 - 2067065..2067478 (-) 414 WP_020977397.1 hypothetical protein -
  CTB89_RS10470 - 2067507..2067617 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=68429 CTB89_RS10440 WP_001017131.1 2062303..2063346(-) (vraS) [Staphylococcus aureus strain GN3]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=68429 CTB89_RS10440 WP_001017131.1 2062303..2063346(-) (vraS) [Staphylococcus aureus strain GN3]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGTATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAACGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment