Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   SNAG_RS08400 Genome accession   NZ_AP017652
Coordinates   1657158..1658918 (-) Length   586 a.a.
NCBI ID   WP_096408387.1    Uniprot ID   A0A1E1GCR7
Organism   Streptococcus sp. NPS 308     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1652158..1663918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SNAG_RS08365 (SNAG_1638) - 1652278..1652829 (-) 552 WP_096408376.1 SP0191 family lipoprotein -
  SNAG_RS08370 (SNAG_1639) - 1652840..1654504 (-) 1665 WP_096408379.1 DAK2 domain-containing protein -
  SNAG_RS08375 (SNAG_1640) - 1654507..1654872 (-) 366 WP_000216432.1 Asp23/Gls24 family envelope stress response protein -
  SNAG_RS08380 (SNAG_1641) rpmB 1655025..1655213 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  SNAG_RS08385 (SNAG_1642) - 1655319..1655993 (-) 675 WP_061407284.1 hypothetical protein -
  SNAG_RS08390 (SNAG_1643) - 1655999..1656445 (-) 447 WP_096408382.1 LytTR family DNA-binding domain-containing protein -
  SNAG_RS08395 (SNAG_1644) - 1656559..1657062 (-) 504 WP_096408384.1 phosphatase PAP2 family protein -
  SNAG_RS08400 (SNAG_1645) rcrQ 1657158..1658918 (-) 1761 WP_096408387.1 ABC transporter ATP-binding protein Regulator
  SNAG_RS08405 (SNAG_1646) rcrP 1658908..1660677 (-) 1770 WP_096408389.1 ABC transporter ATP-binding protein Regulator
  SNAG_RS08410 (SNAG_1647) - 1660661..1661122 (-) 462 WP_096408392.1 MarR family winged helix-turn-helix transcriptional regulator -
  SNAG_RS08415 (SNAG_1648) - 1661313..1662017 (+) 705 WP_096408394.1 CD20-like domain-containing protein -
  SNAG_RS08420 (SNAG_1649) - 1662065..1662781 (-) 717 WP_096408397.1 YebC/PmpR family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 65014.95 Da        Isoelectric Point: 4.9122

>NTDB_id=68368 SNAG_RS08400 WP_096408387.1 1657158..1658918(-) (rcrQ) [Streptococcus sp. NPS 308]
MENKKMSLWKQCRPFLAGLQLPLLVAVVAAVCSSIITVYGPTKIKEITNLISDGLMTGIDLEAVSSIASFLVILYVLGII
LNYTQAYIFSTSIQHFSQRLRKAIAEKINRLPLGYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGTVISASFLLIAVLITM
FGMNWILALVTVVSTLIGFVFVSVFMGKSQGFFKSQQQDLAAVNGYVEEMYSGHNVVASYNAIESTKEEFAKLNHRLYDS
IWKSQFISGIMMPIMIFIGNFSYVLVIIVGAALALNGHISIGIIVAFMAYVRIFSQPLSQIAQGITSLQQASAAMGRVFE
FLDEEEMADESHKERQLTNMKGEVVFDQVSFGYTPERTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVDTKDIKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQIDISDERMMEASKAVGIHHFIMTLPDGYDTILDDTVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEDLMAQAGFYADLYNSQFTEDDAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=68368 SNAG_RS08400 WP_096408387.1 1657158..1658918(-) (rcrQ) [Streptococcus sp. NPS 308]
ATGGAAAATAAGAAAATGTCCTTATGGAAACAGTGTAGACCTTTTCTAGCAGGTCTCCAACTTCCCCTACTAGTCGCAGT
TGTGGCGGCTGTATGTTCTAGTATCATCACGGTGTATGGACCAACCAAGATAAAAGAAATCACCAACTTAATCTCAGATG
GCTTGATGACTGGAATTGACCTGGAGGCTGTGTCAAGTATTGCTAGCTTTTTGGTTATCCTTTATGTACTTGGTATTATC
CTTAACTATACACAAGCCTACATTTTTTCAACTAGTATCCAACATTTTTCACAACGTTTGCGGAAGGCTATCGCTGAAAA
AATCAATCGCTTGCCTCTAGGCTATTTTGACCGTCATTCTCAAGGGGATACCCTTTCGCGCGTGACCAATGATGTGGATA
CAGCAGCTCAGTCTCTTAACCAAAGTCTAGGGACAGTTATCTCAGCTAGTTTCTTGTTGATTGCTGTTTTGATTACCATG
TTTGGCATGAACTGGATTTTGGCACTGGTAACAGTTGTTTCAACTCTTATCGGTTTCGTTTTCGTGTCCGTCTTTATGGG
CAAGTCACAGGGCTTTTTTAAGAGTCAGCAACAGGATTTGGCAGCTGTAAATGGCTATGTGGAAGAAATGTACTCTGGCC
ATAATGTGGTGGCTAGCTACAATGCTATCGAGAGCACTAAAGAAGAATTTGCGAAATTAAATCATCGTCTATATGACAGT
ATCTGGAAGTCTCAGTTTATTTCAGGAATTATGATGCCAATCATGATATTCATTGGAAACTTTAGCTACGTCTTGGTGAT
TATCGTTGGTGCAGCCTTGGCATTGAATGGGCACATCAGTATCGGGATTATCGTTGCCTTTATGGCTTACGTGCGTATCT
TTTCTCAACCCCTTTCTCAAATTGCCCAAGGAATTACCAGTCTTCAACAGGCTAGCGCAGCCATGGGACGTGTCTTCGAA
TTTCTAGATGAAGAGGAAATGGCAGATGAATCTCATAAGGAAAGACAATTAACCAACATGAAAGGTGAAGTGGTCTTTGA
TCAGGTGTCCTTTGGCTATACACCAGAACGCACCATCATCCATGACTTCTCTGCGACAGCTCATGCTGGTCAAAAGGTTG
CCATTGTTGGACCGACTGGGGCTGGTAAGACAACCATTGTCAATCTTTTGATGAAATTCTATGAGATTGATAAGGGAAGT
ATCCGTATCGATGGTGTGGATACTAAGGACATAAAGCGCTCAGAAGTGCACGATGCCTTTTCAATGGTTTTGCAGGACAC
TTGGCTCTTTGAAGGAACCATTCGAGAAAATCTCATCTACAATCAGATAGACATCAGTGATGAACGAATGATGGAAGCCA
GCAAGGCTGTGGGAATTCACCACTTTATCATGACTTTGCCAGATGGCTACGATACTATTTTGGATGACACTGTGACCTTG
TCTGTTGGACAGAAACAGCTCTTGACTATCGCTCGTGCCTTGCTCAAGGACGCACCACTCTTGATTTTGGACGAGGCGAC
ATCCTCAGTCGACACACGTACAGAGGAGTTGATTCAAAAAGCCATGGACCGTTTGATGGAGGGTCGAACTTCCTTTGTCA
TCGCCCACCGCTTGTCTACTATCCGAAATGCCGACTTGATTCTTGTCATGAAAGATGGAAATATCATTGAACAAGGCAAT
CACGAGGACCTGATGGCCCAAGCTGGCTTCTACGCCGACTTGTACAATAGTCAATTTACAGAAGATGATGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1E1GCR7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

67.295

99.659

0.671

Multiple sequence alignment