Detailed information    

insolico Bioinformatically predicted

Overview

Name   rec2   Type   Machinery gene
Locus tag   OLL86_RS00775 Genome accession   NZ_CP110225
Coordinates   162104..164443 (+) Length   779 a.a.
NCBI ID   WP_264780487.1    Uniprot ID   -
Organism   Gallibacterium anatis strain IMT49310     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 157104..169443
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OLL86_RS00750 (OLL86_00750) - 158158..158439 (-) 282 WP_264780108.1 hypothetical protein -
  OLL86_RS00755 (OLL86_00755) - 158424..159077 (-) 654 WP_076611454.1 IS1595-like element ISEc69 family transposase -
  OLL86_RS00760 (OLL86_00760) folK 159150..159632 (-) 483 WP_264780109.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  OLL86_RS00765 (OLL86_00765) pcnB 159632..161140 (-) 1509 WP_039080896.1 polynucleotide adenylyltransferase PcnB -
  OLL86_RS00770 (OLL86_00770) dksA 161277..161726 (-) 450 WP_026211023.1 RNA polymerase-binding protein DksA -
  OLL86_RS00775 (OLL86_00775) rec2 162104..164443 (+) 2340 WP_264780487.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  OLL86_RS00780 (OLL86_00780) msbA 164516..166264 (+) 1749 WP_013745483.1 lipid A ABC transporter ATP-binding protein/permease MsbA -
  OLL86_RS00785 (OLL86_00785) lpxK 166285..167262 (+) 978 WP_264780110.1 tetraacyldisaccharide 4'-kinase -
  OLL86_RS00790 (OLL86_00790) - 167259..167456 (+) 198 WP_264780111.1 Trm112 family protein -
  OLL86_RS00795 (OLL86_00795) kdsB 167458..168234 (+) 777 WP_264780112.1 3-deoxy-manno-octulosonate cytidylyltransferase -

Sequence

Protein


Download         Length: 779 a.a.        Molecular weight: 90242.97 Da        Isoelectric Point: 8.9068

>NTDB_id=683568 OLL86_RS00775 WP_264780487.1 162104..164443(+) (rec2) [Gallibacterium anatis strain IMT49310]
MYLPFAWIFLTAFWGVFFTVASLLALWLIRKKNQWGGVIISIIFSCCWCLFLIQQLITQAQYVQTLPKKQRAQIMIEKVL
HQRDYQTAIALLKFSDEDENYRFYLSWQTPQQLAAGQSWLGEVTLKPLASRANFGGFHRQKWLYANHIVGYAVVKNAVFV
ADHPDLRERLLRHNLDLWQQQPQSELFLALGFGDKRFLSQDTLQLFQQTGTAHLIAISGLHIGLVMLLGVALARSVQYFL
PAHRITPFLPLLFGGMCALLYSYLADFSIPTVRAIIALIFLLWLRFFRSYLNWWQCYVRCIAIFVLLDPLILLSDSFWLS
ALAVLCLLIWNHLFPLSVCSVRGKKLHQFGKITYYILALIHLQIGLFLLFTPITIFFFSGFNFFNLWINLWIVPIFSFVL
IPLILFSILTFDYFHSWALCQFIAQQCVEGLKIFKTGWHPVSELENLWISLIFLGLCLLWGMFCIRYAKYQRTKTDEHHW
LPTSTLFRLEVSALVERTDFQTILKIIGMILGIMLWQLGFYYYQQYRILWTLEMLDVGQGMSILIRQNGKGVLYDTAASW
RGGSMAELEIIPYLQRQGIELEAIIISHDDNDHSGGAEMLLRYFPNATLITSSEKTYAGKTPEPCYQGVQWRWRDLNWQV
IAPYKVEKTAKNHQSCVMLINDGKHNVLLTGDLDKTAELQYLEHFPTIDILQVAHHGSRTSTSTTFLQKTAPKIALISVG
IGNQWHFPHQDIISRLRQFQVDTLVTATVGQIRLRFTKQGNIEVETARTLLQPWFKQLL

Nucleotide


Download         Length: 2340 bp        

>NTDB_id=683568 OLL86_RS00775 WP_264780487.1 162104..164443(+) (rec2) [Gallibacterium anatis strain IMT49310]
ATGTATTTGCCGTTTGCATGGATTTTTTTGACTGCATTTTGGGGTGTTTTTTTCACTGTCGCTTCATTGCTTGCCCTATG
GTTAATAAGAAAGAAAAATCAGTGGGGAGGTGTGATAATTTCAATAATATTTTCGTGTTGTTGGTGTCTGTTTTTGATAC
AACAACTCATCACACAAGCGCAGTATGTGCAGACACTCCCGAAGAAACAGCGCGCGCAGATTATGATTGAAAAAGTTTTG
CATCAACGGGATTATCAAACGGCAATTGCATTATTGAAATTTTCGGATGAAGATGAGAACTATCGTTTTTATTTGAGTTG
GCAAACACCACAACAGCTGGCTGCCGGACAATCTTGGCTAGGAGAAGTCACGCTAAAACCATTAGCGTCAAGAGCTAATT
TTGGTGGTTTTCATCGTCAAAAATGGTTGTATGCAAATCATATTGTTGGCTATGCTGTTGTGAAAAATGCAGTTTTTGTT
GCAGATCATCCCGATTTGCGCGAGCGATTATTGCGGCATAATTTGGATTTATGGCAACAGCAACCACAGTCAGAATTATT
TCTTGCATTGGGATTTGGTGATAAGCGTTTTTTGAGTCAGGACACGTTACAACTGTTTCAACAGACCGGAACAGCGCATT
TAATTGCGATTTCAGGCTTGCATATCGGTTTAGTAATGTTGTTGGGCGTGGCTTTAGCGCGTAGTGTGCAGTATTTCTTG
CCGGCGCATCGGATTACGCCTTTTTTGCCGCTATTATTCGGTGGAATGTGTGCGTTGTTATACAGTTATTTAGCTGATTT
TTCGATCCCGACTGTCCGAGCCATTATTGCATTGATCTTCCTGTTGTGGCTAAGATTTTTTCGCAGTTATTTAAATTGGT
GGCAATGTTATGTGCGTTGTATCGCGATTTTTGTGCTATTGGATCCACTTATTCTGTTAAGTGATAGCTTTTGGCTATCC
GCATTGGCGGTGTTATGTTTATTGATATGGAATCATCTGTTTCCCTTATCTGTTTGCTCGGTGCGAGGAAAAAAACTCCA
TCAATTCGGTAAAATTACTTATTACATTTTGGCGCTTATTCATCTACAAATCGGACTGTTTCTGCTATTTACACCGATTA
CAATTTTCTTTTTTTCAGGTTTTAATTTCTTTAATCTATGGATTAATTTATGGATTGTGCCGATTTTCAGTTTTGTACTC
ATTCCATTAATTTTGTTCTCCATTTTAACGTTTGATTACTTCCACAGTTGGGCGTTATGCCAGTTTATTGCACAACAATG
TGTTGAGGGCTTAAAGATATTTAAAACTGGCTGGCATCCTGTTTCAGAGCTGGAAAATCTCTGGATAAGCTTGATTTTTC
TAGGCTTGTGTTTGCTTTGGGGAATGTTTTGTATTCGCTATGCTAAATATCAACGAACTAAAACGGATGAGCATCATTGG
TTGCCGACATCAACACTATTCCGTTTAGAGGTGTCTGCTTTAGTTGAGCGTACCGATTTTCAAACTATTTTGAAAATAAT
AGGAATGATTTTAGGCATAATGCTATGGCAATTAGGCTTCTATTATTATCAACAATATCGCATTTTATGGACGCTGGAAA
TGTTGGATGTAGGGCAGGGGATGTCGATATTGATCCGGCAAAATGGCAAAGGAGTTTTGTATGATACGGCAGCTTCGTGG
CGCGGTGGCAGTATGGCTGAATTGGAAATTATTCCCTATTTGCAACGGCAAGGTATTGAATTGGAAGCGATTATTATTAG
TCACGATGATAATGATCATAGCGGTGGCGCTGAGATGTTGCTTCGTTATTTTCCGAATGCCACATTGATCACTTCATCCG
AAAAAACATATGCCGGAAAAACGCCTGAACCCTGTTATCAAGGCGTTCAATGGCGTTGGCGTGATTTAAATTGGCAAGTG
ATAGCGCCGTATAAAGTAGAAAAAACAGCGAAAAATCATCAATCTTGCGTGATGTTGATCAATGATGGCAAACATAATGT
CCTGTTAACCGGTGATCTGGATAAAACGGCGGAATTGCAGTATTTAGAACATTTCCCGACGATTGATATTTTGCAGGTGG
CGCATCACGGTAGCCGTACTTCGACCAGTACCACATTTTTGCAAAAAACAGCACCGAAGATAGCATTAATTTCTGTCGGC
ATAGGCAATCAATGGCATTTTCCGCATCAGGACATTATTTCACGATTACGGCAATTTCAAGTTGATACGTTGGTAACGGC
AACTGTAGGACAGATTCGATTACGTTTTACCAAGCAGGGCAATATTGAAGTTGAAACGGCAAGAACATTATTACAACCTT
GGTTTAAGCAGTTACTTTAA

Domains

Predicted by InterProScan.

Competence protein (Competence)

(190-465)

Domain of unknown function (DUF4131) (DUF4131)

(12-154)

Metallo-beta-lactamase superfamily (Lactamase_B)

(536-720)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rec2 Haemophilus influenzae Rd KW20

39.807

93.196

0.371