Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SNAG_RS02020 Genome accession   NZ_AP017652
Coordinates   370201..370932 (+) Length   243 a.a.
NCBI ID   WP_096406090.1    Uniprot ID   A0A1E1G956
Organism   Streptococcus sp. NPS 308     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 365201..375932
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SNAG_RS02000 (SNAG_0396) dnaK 366007..367830 (+) 1824 WP_000034683.1 molecular chaperone DnaK -
  SNAG_RS02005 (SNAG_0397) dnaJ 368264..369400 (+) 1137 WP_001066313.1 molecular chaperone DnaJ -
  SNAG_RS02010 (SNAG_0398) - 369426..369713 (-) 288 WP_000777744.1 hypothetical protein -
  SNAG_RS02015 (SNAG_0399) - 369723..370133 (-) 411 WP_096406088.1 HIT family protein -
  SNAG_RS02020 (SNAG_0400) pptA 370201..370932 (+) 732 WP_096406090.1 ABC transporter ATP-binding protein Regulator
  SNAG_RS02025 (SNAG_0401) pptB 370929..371978 (+) 1050 WP_096406093.1 ABC transporter permease Regulator
  SNAG_RS02030 (SNAG_0402) - 372026..372820 (+) 795 WP_096406096.1 phosphotransferase family protein -
  SNAG_RS02035 (SNAG_0403) trmB 372817..373452 (+) 636 WP_096406098.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SNAG_RS02040 (SNAG_0404) rimP 373579..374058 (+) 480 WP_096406101.1 ribosome maturation factor RimP -
  SNAG_RS02045 (SNAG_0405) nusA 374101..375237 (+) 1137 WP_084976039.1 transcription termination factor NusA -
  SNAG_RS02050 (SNAG_0406) - 375259..375552 (+) 294 WP_096406104.1 YlxR family protein -
  SNAG_RS02055 (SNAG_0407) - 375545..375844 (+) 300 WP_001041396.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27125.57 Da        Isoelectric Point: 4.6989

>NTDB_id=68337 SNAG_RS02020 WP_096406090.1 370201..370932(+) (pptA) [Streptococcus sp. NPS 308]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGEIKINGLTLREDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQNIAFERVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAIADLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAQGNLQQLREAFDMPEASLNDIYLALTKE
GDL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=68337 SNAG_RS02020 WP_096406090.1 370201..370932(+) (pptA) [Streptococcus sp. NPS 308]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTTCACGTCCCTGTCTTGAAAGATGTGTCCTTTACAGTTGAAAGTGG
GCAGTTGGTTGGTTTGATTGGTCTTAACGGTGCTGGAAAATCAACGACTATCAATGAAATTATCGGTCTTTTGACACCTT
ACAGTGGGGAAATCAAGATTAATGGTCTAACCCTGCGAGAAGATGCGACTAGCTACCGCAAGCAGATTGGCTACATCCCA
GAGACGCCTAGCTTGTATGAAGAACTGACCCTCAGGGAGCATATCGAGACGGTTGCCATGGCTTATGGTATTGAGCAAAA
TATAGCTTTTGAGCGAGTAGAACCTTTGTTAAAGATGTTTCGTTTGGATCAAAAATTAGATTGGTTTCCTGTGCATTTCT
CCAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTGGTGGATCCGAGTCTCTTTATCGTGGATGAGCCTTTT
CTTGGTCTGGATCCGCTAGCTATTGCAGACTTGATTCAGCTTTTGGAAGTAGAAAAGCAAAAAGGCAAGTCCATCCTCAT
GAGTACCCACGTGCTGGACTCGGCGGAGAAGATGTGTGACGCCTTTGTTATTCTCCACAAGGGAGAGGTGCGGGCTCAGG
GGAACCTCCAGCAACTCCGCGAGGCTTTTGATATGCCCGAGGCTAGCTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GGGGACCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1E1G956

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

98.354

0.716
  pptA Streptococcus thermophilus LMD-9

71.967

98.354

0.708

Multiple sequence alignment