Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   OKW88_RS14900 Genome accession   NZ_CP110105
Coordinates   2905922..2906749 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain CF03     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2900922..2911749
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OKW88_RS14875 (OKW88_14845) efpO 2901985..2903427 (+) 1443 WP_003226777.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  OKW88_RS14880 (OKW88_14850) tmk 2903424..2904062 (+) 639 WP_003226776.1 dTMP kinase -
  OKW88_RS14885 (OKW88_14855) darA 2904136..2904465 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  OKW88_RS14890 (OKW88_14860) yaaR 2904478..2904918 (+) 441 WP_009966249.1 YaaR family protein -
  OKW88_RS14895 (OKW88_14865) holB 2904930..2905919 (+) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  OKW88_RS14900 (OKW88_14870) yaaT 2905922..2906749 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  OKW88_RS14905 (OKW88_14875) yabA 2906764..2907123 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  OKW88_RS14910 (OKW88_14880) trmNF 2907182..2907925 (+) 744 WP_003226765.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  OKW88_RS14915 (OKW88_14885) yazA 2907912..2908211 (+) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  OKW88_RS14920 (OKW88_14890) rsmI 2908186..2909064 (+) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  OKW88_RS14925 (OKW88_14895) abrB 2909109..2909399 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=683112 OKW88_RS14900 WP_003226767.1 2905922..2906749(+) (yaaT) [Bacillus subtilis strain CF03]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=683112 OKW88_RS14900 WP_003226767.1 2905922..2906749(+) (yaaT) [Bacillus subtilis strain CF03]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996