Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   OKW88_RS08930 Genome accession   NZ_CP110105
Coordinates   1752922..1753617 (-) Length   231 a.a.
NCBI ID   WP_029318284.1    Uniprot ID   -
Organism   Bacillus subtilis strain CF03     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1747922..1758617
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OKW88_RS08910 (OKW88_08900) yttA 1748348..1749095 (+) 748 Protein_1775 LMBR1 domain-containing protein -
  OKW88_RS08915 (OKW88_08905) bceB 1749132..1751072 (-) 1941 WP_003229139.1 bacitracin ABC transporter permease BceB -
  OKW88_RS08920 (OKW88_08910) bceA 1751062..1751823 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  OKW88_RS08925 (OKW88_08915) bceS 1751925..1752929 (-) 1005 WP_024573099.1 two-component sensor histidine kinase BceS -
  OKW88_RS08930 (OKW88_08920) braR 1752922..1753617 (-) 696 WP_029318284.1 two-component response regulator BceR Regulator
  OKW88_RS08935 (OKW88_08925) ytrF 1753714..1755024 (-) 1311 WP_029318285.1 ABC transporter permease YtrF -
  OKW88_RS08940 (OKW88_08930) ytrE 1755014..1755709 (-) 696 WP_151262389.1 ABC transporter ATP-binding protein YtrE -
  OKW88_RS08945 (OKW88_08935) ytrD 1755724..1756701 (-) 978 WP_407568088.1 ABC transporter permease YtrD -
  OKW88_RS08950 (OKW88_08940) ytrC 1756731..1757717 (-) 987 WP_317680314.1 ABC transporter permease YtrC -
  OKW88_RS08955 (OKW88_08945) ytrB 1757711..1758589 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26896.83 Da        Isoelectric Point: 5.3731

>NTDB_id=683079 OKW88_RS08930 WP_029318284.1 1752922..1753617(-) (braR) [Bacillus subtilis strain CF03]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNMEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=683079 OKW88_RS08930 WP_029318284.1 1752922..1753617(-) (braR) [Bacillus subtilis strain CF03]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATATGGAGCCGAGTACGATTAAAACGTGGTGTG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTTTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377