Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   OIM89_RS08945 Genome accession   NZ_CP110079
Coordinates   2081997..2082977 (-) Length   326 a.a.
NCBI ID   WP_047467416.1    Uniprot ID   A0A7Y6F1I9
Organism   Streptomyces sp. BI87     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 2076997..2087977
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIM89_RS08930 (OIM89_08930) - 2077271..2079412 (+) 2142 WP_047467410.1 S9 family peptidase -
  OIM89_RS08935 (OIM89_08935) - 2079409..2080407 (-) 999 WP_030695771.1 hypothetical protein -
  OIM89_RS08940 (OIM89_08940) - 2080805..2082010 (-) 1206 WP_030695772.1 ABC transporter ATP-binding protein -
  OIM89_RS08945 (OIM89_08945) amiE 2081997..2082977 (-) 981 WP_047467416.1 ABC transporter ATP-binding protein Regulator
  OIM89_RS08950 (OIM89_08950) - 2082991..2083977 (-) 987 WP_030695774.1 ABC transporter permease -
  OIM89_RS08955 (OIM89_08955) - 2083970..2084893 (-) 924 WP_030695775.1 ABC transporter permease -
  OIM89_RS08960 (OIM89_08960) - 2084985..2086616 (-) 1632 WP_195730406.1 peptide ABC transporter substrate-binding protein -
  OIM89_RS08965 (OIM89_08965) - 2086821..2087969 (-) 1149 WP_030695777.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 326 a.a.        Molecular weight: 35874.53 Da        Isoelectric Point: 6.6592

>NTDB_id=682967 OIM89_RS08945 WP_047467416.1 2081997..2082977(-) (amiE) [Streptomyces sp. BI87]
MLLDVRDLQVEFHTREGVAKAVNGVSYSVDAGETLAVLGESGSGKSVTAQAVMGILDTPPGHITGGQIIFEGRDLLTLKE
DRRRKVRGAEMAMIFQDALSSLNPVLTVGEQLGEMFTVHRGMSRKDAKARAVELMDRVRIPAATERVDQYPHQFSGGMRQ
RIMIAMAMALEPKLIIADEPTTALDVTVQAQVMELLAELQREYNMGLILITHDLGVVADVADKIAVMYAGRIVETAPVHD
IYRAPAHPYTRGLLDSIPRLDQKGRELYAIKGLPPNLLAIPPGCAFHPRCPLAQPVCTTDEPPLYEVDPRRRSACHFWKE
TLHGAR

Nucleotide


Download         Length: 981 bp        

>NTDB_id=682967 OIM89_RS08945 WP_047467416.1 2081997..2082977(-) (amiE) [Streptomyces sp. BI87]
ATGTTGCTCGACGTGCGCGACCTCCAGGTGGAGTTCCACACCAGGGAAGGCGTCGCCAAGGCCGTCAACGGCGTCTCCTA
CTCCGTCGACGCGGGGGAGACCCTGGCGGTGCTCGGCGAATCCGGCTCCGGCAAGTCCGTCACCGCCCAGGCGGTCATGG
GCATCCTCGACACCCCGCCCGGGCACATCACGGGCGGGCAGATCATCTTCGAGGGGCGCGACCTGCTGACCCTCAAGGAG
GACCGGCGGCGCAAGGTGCGGGGCGCCGAGATGGCGATGATCTTCCAGGACGCGCTCTCCTCGCTCAACCCGGTGCTCAC
CGTCGGCGAGCAGCTCGGCGAGATGTTCACCGTCCACCGCGGCATGTCCCGCAAGGACGCCAAGGCGCGGGCGGTCGAGC
TGATGGACCGGGTCCGCATCCCCGCCGCCACCGAACGCGTCGACCAGTACCCGCACCAGTTCTCCGGCGGCATGCGCCAG
CGCATCATGATCGCCATGGCGATGGCGCTGGAGCCCAAGCTGATCATCGCCGACGAGCCCACCACCGCCCTCGACGTCAC
GGTCCAGGCCCAGGTCATGGAGCTGCTCGCGGAGCTCCAGCGCGAGTACAACATGGGGCTCATCCTCATCACCCACGACC
TCGGTGTCGTCGCCGACGTCGCCGACAAGATCGCCGTGATGTACGCGGGCCGGATCGTGGAGACCGCCCCCGTCCACGAC
ATCTACCGGGCCCCCGCCCACCCGTACACCCGCGGCCTGCTCGACTCCATCCCGCGCCTGGACCAGAAGGGCCGGGAGCT
GTACGCGATCAAGGGGCTGCCGCCCAACCTGCTGGCCATCCCGCCCGGCTGCGCCTTCCACCCGCGCTGCCCGCTGGCCC
AGCCGGTCTGCACCACCGACGAGCCGCCGCTCTACGAGGTCGACCCGCGCCGCCGGAGCGCCTGCCACTTCTGGAAGGAG
ACGCTCCATGGAGCCCGATGA

Domains

Predicted by InterProScan.

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(233-297)

ABC transporter (ABC_tran)

(23-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y6F1I9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

46.749

99.08

0.463
  amiE Streptococcus thermophilus LMG 18311

46.13

99.08

0.457
  amiE Streptococcus thermophilus LMD-9

46.13

99.08

0.457
  oppD Streptococcus mutans UA159

46.178

96.319

0.445