Detailed information NTG0682854

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OLR76_RS20760
• Genome accession: NZ_CP110017
• Coordinates: 4223269..4224294 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain HE_50
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4218269..4229294

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OLR76_RS20730 (OLR76_20630)	zapB	4218353..4218598 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
OLR76_RS20735 (OLR76_20635)	rraA	4218683..4219168 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
OLR76_RS20740 (OLR76_20640)	menA	4219261..4220187 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
OLR76_RS20745 (OLR76_20645)	hslU	4220254..4221585 (-)	1332	WP_282983351.1	HslU--HslV peptidase ATPase subunit	-
OLR76_RS20750 (OLR76_20650)	hslV	4221595..4222125 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
OLR76_RS20755 (OLR76_20655)	ftsN	4222218..4223177 (-)	960	WP_000068828.1	cell division protein FtsN	-
OLR76_RS20760 (OLR76_20660)	cytR	4223269..4224294 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
OLR76_RS20765 (OLR76_20665)	priA	4224450..4226648 (-)	2199	WP_282983352.1	primosomal protein N'	Machinery gene
OLR76_RS20770 (OLR76_20670)	rpmE	4226851..4227063 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
OLR76_RS20775 (OLR76_20675)	yiiX	4227124..4227732 (-)	609	WP_282983353.1	YiiX family permuted papain-like enzyme	-
OLR76_RS20780 (OLR76_20680)	metJ	4227916..4228233 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=682854 OLR76_RS20760 WP_000644904.1 4223269..4224294(-) (cytR) [Escherichia coli strain HE_50]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=682854 OLR76_RS20760 WP_000644904.1 4223269..4224294(-) (cytR) [Escherichia coli strain HE_50]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628