Detailed information NTG0682652

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: OHM48_RS04205
• Genome accession: NZ_CP109942
• Coordinates: 854127..855197 (+)
• Length: 356 a.a.
• NCBI ID: WP_012775101.1
• Uniprot ID: A0A0H3MV97
• Organism: Streptococcus suis strain ID35541
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 849127..860197

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHM48_RS04180 (OHM48_04180)	-	850231..850899 (+)	669	WP_011922395.1	SatD family protein	-
OHM48_RS04185 (OHM48_04185)	-	850903..851643 (+)	741	WP_011922396.1	DUF3307 domain-containing protein	-
OHM48_RS04190 (OHM48_04190)	-	851708..852145 (+)	438	WP_011922397.1	AAA family ATPase	-
OHM48_RS04195 (OHM48_04195)	-	852796..853089 (+)	294	WP_264490827.1	Abi family protein	-
OHM48_RS04200 (OHM48_04200)	-	853067..853768 (+)	702	WP_238593584.1	Abi family protein	-
OHM48_RS04205 (OHM48_04205)	xerS	854127..855197 (+)	1071	WP_012775101.1	tyrosine recombinase XerS	Machinery gene
OHM48_RS04210 (OHM48_04210)	-	855267..856775 (-)	1509	WP_011922400.1	phosphomannomutase/phosphoglucomutase	-
OHM48_RS04215 (OHM48_04215)	-	856851..857792 (-)	942	WP_012775102.1	sensor histidine kinase	-
OHM48_RS04220 (OHM48_04220)	braR	857789..858454 (-)	666	WP_012775103.1	response regulator transcription factor	Regulator
OHM48_RS04225 (OHM48_04225)	-	858493..858750 (-)	258	WP_011922404.1	type II toxin-antitoxin system RelE/ParE family toxin	-
OHM48_RS04230 (OHM48_04230)	relB	858734..858985 (-)	252	WP_012775104.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41485.66 Da
• Isoelectric Point: 9.2257

>NTDB_id=682652 OHM48_RS04205 WP_012775101.1 854127..855197(+) (xerS) [Streptococcus suis strain ID35541]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVAVERIADIPLDVLEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMGIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=682652 OHM48_RS04205 WP_012775101.1 854127..855197(+) (xerS) [Streptococcus suis strain ID35541]
ATGAGACGCGAGTTATTATTGGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGTTTTTTTGAATGGTTACAGG
ATTCGGATTTGGTGGCTGTTGAACGGATTGCTGACATTCCGCTGGATGTTCTGGAACATCTGACAAAAAAAGATATGGAA
GCTTTCATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTCTCGGCCCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAGAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACTAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCGGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACGATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCCTTCCAGAAAAATAAGGAGCGGGATTTGGCGATTCTGGCGCTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAACCTCAATATGATGATTATCGAAGTAACTCGTAAGGGTGGTAAACGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTACTTAGAAGCCTACATGGGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACAGCCTTCTTCCTGTCCGAATACCGTGGTCTGCCTAACCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCACACATTGGCAACTCGTCTCTACGACGCCACC
AAGTCGCAAGTTCTAGTCAGTCATCAGCTGGGCCATGCCAATACCCAGGTCACCGATCTCTACACCCATATCGTCAACGA
TGAACAGAAAAATGCTCTGGATCAGTTGTGA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (190-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: A0A0H3MV97

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831