Detailed information NTG0682556

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: OHM51_RS04240
• Genome accession: NZ_CP109941
• Coordinates: 860728..861798 (+)
• Length: 356 a.a.
• NCBI ID: WP_012775101.1
• Uniprot ID: A0A0H3MV97
• Organism: Streptococcus suis strain ID38828
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 855728..866798

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHM51_RS04220 (OHM51_04220)	-	856843..857511 (+)	669	WP_011922395.1	SatD family protein	-
OHM51_RS04225 (OHM51_04225)	-	857515..858255 (+)	741	WP_011922396.1	DUF3307 domain-containing protein	-
OHM51_RS04230 (OHM51_04230)	-	858320..858757 (+)	438	WP_011922397.1	AAA family ATPase	-
OHM51_RS04235 (OHM51_04235)	-	859468..860369 (+)	902	Protein_785	Abi family protein	-
OHM51_RS04240 (OHM51_04240)	xerS	860728..861798 (+)	1071	WP_012775101.1	tyrosine recombinase XerS	Machinery gene
OHM51_RS04245 (OHM51_04245)	-	861868..863376 (-)	1509	WP_011922400.1	phosphomannomutase/phosphoglucomutase	-
OHM51_RS04250 (OHM51_04250)	-	863452..864393 (-)	942	WP_012775102.1	sensor histidine kinase	-
OHM51_RS04255 (OHM51_04255)	braR	864390..865055 (-)	666	WP_012775103.1	response regulator transcription factor	Regulator
OHM51_RS04260 (OHM51_04260)	-	865094..865351 (-)	258	WP_011922404.1	type II toxin-antitoxin system RelE/ParE family toxin	-
OHM51_RS04265 (OHM51_04265)	relB	865335..865586 (-)	252	WP_012775104.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41485.66 Da
• Isoelectric Point: 9.2257

>NTDB_id=682556 OHM51_RS04240 WP_012775101.1 860728..861798(+) (xerS) [Streptococcus suis strain ID38828]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVAVERIADIPLDVLEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMGIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=682556 OHM51_RS04240 WP_012775101.1 860728..861798(+) (xerS) [Streptococcus suis strain ID38828]
ATGAGACGCGAGTTATTATTGGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGTTTTTTTGAATGGTTACAGG
ATTCGGATTTGGTGGCTGTTGAACGGATTGCTGACATTCCGCTGGATGTTCTGGAACATCTGACAAAAAAAGATATGGAA
GCTTTCATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTCTCGGCCCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAGAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACTAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCGGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACGATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCCTTCCAGAAAAATAAGGAGCGGGATTTGGCGATTCTGGCGCTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAACCTCAATATGATGATTATCGAAGTAACTCGTAAGGGTGGTAAACGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTACTTAGAAGCCTACATGGGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACAGCCTTCTTCCTGTCCGAATACCGTGGTCTGCCTAACCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCACACATTGGCAACTCGTCTCTACGACGCCACC
AAGTCGCAAGTTCTAGTCAGTCATCAGCTGGGCCATGCCAATACCCAGGTCACCGATCTCTACACCCATATCGTCAACGA
TGAACAGAAAAATGCTCTGGATCAGTTGTGA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (190-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: A0A0H3MV97

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831