Detailed information NTG0682344

Bioinformatically predicted

Overview

• Name: rexB
• Type: Machinery gene
• Locus tag: OHM47_RS02090
• Genome accession: NZ_CP109939
• Coordinates: 402343..405609 (+)
• Length: 1088 a.a.
• NCBI ID: WP_029178565.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID36054
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 397343..410609

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHM47_RS02080 (OHM47_02080)	-	397736..397900 (+)	165	WP_024381780.1	hypothetical protein	-
OHM47_RS02085 (OHM47_02085)	-	398324..402052 (+)	3729	WP_105152519.1	MucBP domain-containing protein	-
OHM47_RS02090 (OHM47_02090)	rexB	402343..405609 (+)	3267	WP_029178565.1	ATP-dependent nuclease subunit B	Machinery gene
OHM47_RS02095 (OHM47_02095)	rexA	405609..409262 (+)	3654	WP_024394348.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
OHM47_RS02100 (OHM47_02100)	plsY	409272..409916 (-)	645	WP_009909724.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	-

Sequence

Protein

• Length: 1088 a.a.
• Molecular weight: 124536.89 Da
• Isoelectric Point: 5.1283

>NTDB_id=682344 OHM47_RS02090 WP_029178565.1 402343..405609(+) (rexB) [Streptococcus suis strain ID36054]
MKLVYTDIRNPLTQYLTDTSAEFAKEAKRVFYIAPNSLSFEMERKVLEYLPEQATFDIIVTRFGQLARYLMIDRKEAGQP
LDDVGLAMIFFRVLSQFEDGDLKVYGRLQRDFGFINQLVALYKELQRANMSILDLEAMDSPDKQADLVKIFLAVTDILSK
ESFEHQSKLAQLTGLVETGQLDEQLKNIVLVVDGFSRFSAEEEALVSALNERVSEILIGVYASKKAVQVIYAEGNVYQAN
VDFLRQLSAQFQTKATYIGQEPVLDSIGKFSKNMEAYYDYSGTMIDLTPADQEKIQLWEVVNQKEEVEQVATAIRQHIHQ
GARYKDILLLLGDVDSYKLQIGKIFDKYDIPYYFGKAEEMSHHPLVHFVESLERLRRYRFRAEDLLNLLKSGLYASISQK
ELDLFESYILFADMKGQAAFSRAFVANSRADYDTEVIKEKRLVYDLNVLEPLRAKIMEPLNQLFKAGPQSGAALLEKFMA
FLEAIELPKNMEKMSRNLSEVEQEKEEQVWKSFTHLLENFHQIFGKEKLKMDDFLAILQAGMQASHYRTVPATVDVVNVK
SYDLIEPHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEKVNLVSASSSRFDLVSRENIKKNHAAMMSLLNAATEQLVIS
TPQIYNEGEDSLSPYIKILQKMGLKSEERGRIKTLSPQDIGHYKSLLSRLIESERPSLETEEWEGQRAFWTVLVRHLKKK
LESQGIEIPTITGDIASKQLSDETLAALYPEDKPLNLSASSLTNFYNNQYLYFVHNVLRLREQESIHPTAFQHGLFLHRI
FERVVMDQSELDFDQKVDKAILRTRDEAEFAMFYNQDADARYTEEVLDKIARSSATILRDNDLVEIDGQEKSFRQDKALV
FDLQNGKSVHVNGTIDRLDTLQINQAVGVVDYKSSDQSFSVGDFYNGLKPQLVTYLAALQELDETKDKPVFGAMYLHLQD
PIIKLKDTKNLEQLEGAANTSLVYKGLFLKEESLGLNHFYQTRNQLYTEDEFAVLLNHNQELYKQAAMDILAGRFAINPY
TKDGRSVAGEQLKAITGFEADRHMGMARRLVKEAKRQDWMERMKGGPD

Nucleotide

• Length: 3267 bp

>NTDB_id=682344 OHM47_RS02090 WP_029178565.1 402343..405609(+) (rexB) [Streptococcus suis strain ID36054]
ATGAAATTAGTCTATACAGATATTCGCAATCCTCTGACGCAGTATTTAACGGATACCTCGGCAGAATTTGCTAAGGAAGC
TAAGCGAGTTTTTTATATTGCTCCAAACTCTCTATCCTTTGAGATGGAACGCAAGGTCTTGGAATACCTGCCAGAACAGG
CAACTTTTGATATTATCGTGACCCGTTTTGGGCAATTGGCCCGCTATTTGATGATTGATAGGAAAGAAGCAGGTCAACCG
CTGGATGATGTTGGTCTGGCAATGATTTTCTTTCGTGTTCTATCGCAATTTGAAGATGGCGACTTGAAAGTCTATGGTCG
TTTGCAGAGAGATTTTGGTTTCATTAACCAGCTAGTTGCTTTATACAAAGAATTGCAACGGGCAAATATGTCTATTTTGG
ACTTGGAAGCCATGGACTCACCAGATAAGCAGGCTGATTTGGTAAAGATTTTTCTGGCTGTAACAGACATTTTGTCCAAA
GAAAGCTTTGAGCATCAGTCTAAGTTAGCACAGTTGACTGGCTTGGTAGAAACTGGTCAGTTGGATGAGCAGTTGAAGAA
CATTGTGCTGGTGGTAGACGGATTTTCTCGTTTTTCGGCAGAAGAAGAAGCTTTAGTAAGTGCTTTAAATGAACGGGTGT
CGGAAATCCTAATTGGTGTATATGCCAGCAAGAAAGCTGTGCAAGTCATCTATGCGGAAGGCAATGTCTATCAAGCCAAC
GTTGACTTTTTACGTCAGCTATCAGCGCAGTTCCAGACTAAGGCTACTTATATTGGTCAAGAGCCAGTCTTGGACAGTAT
TGGTAAATTTTCAAAGAATATGGAAGCCTATTATGACTACAGCGGGACCATGATAGACTTGACTCCAGCAGATCAAGAAA
AAATCCAGCTATGGGAAGTCGTTAACCAAAAAGAAGAGGTGGAGCAGGTAGCAACGGCAATTCGCCAACACATACACCAA
GGAGCTCGCTATAAAGACATCTTGTTGCTCTTGGGTGATGTGGATAGCTACAAGTTGCAGATTGGCAAAATTTTTGACAA
ATATGATATTCCCTACTATTTTGGTAAGGCAGAGGAGATGAGCCATCATCCCCTAGTCCACTTTGTGGAGTCCTTGGAGC
GCTTGCGTCGCTATCGTTTCCGTGCGGAAGACCTGCTCAATCTCCTCAAATCTGGTTTGTACGCCAGCATTTCCCAAAAG
GAGCTGGACTTGTTTGAGTCCTACATCCTCTTTGCGGATATGAAGGGGCAGGCTGCTTTTTCGAGGGCTTTTGTGGCCAA
TAGCAGAGCTGACTATGACACTGAAGTTATTAAGGAGAAAAGACTTGTCTATGATTTGAATGTTTTGGAACCCCTACGTG
CTAAGATTATGGAACCTTTGAACCAGTTGTTTAAGGCTGGACCACAATCTGGAGCAGCCTTGCTTGAGAAATTTATGGCT
TTTTTGGAGGCAATTGAGCTTCCTAAAAATATGGAAAAAATGTCTCGAAATTTGAGCGAAGTAGAGCAAGAAAAAGAAGA
GCAGGTCTGGAAAAGTTTTACCCATCTTCTTGAGAATTTTCATCAGATTTTCGGAAAAGAAAAGTTGAAAATGGATGATT
TTCTGGCTATTTTACAGGCTGGTATGCAGGCCAGCCACTATCGTACCGTTCCTGCAACGGTTGATGTGGTCAATGTCAAA
TCCTATGATTTGATCGAGCCACACACTGCAAAGTATGTTTATGCTATCGGAATGGGACAGTCCAATTTTCCAAAAGTTGC
CAAGAATACCAGTCTATTGACGGAAGAAGAGATGGAAAAAGTCAATCTTGTTTCAGCTAGTTCTTCACGTTTTGATTTGG
TCAGCCGAGAGAATATCAAGAAGAACCATGCTGCCATGATGTCTCTGCTTAATGCTGCGACGGAACAGTTAGTTATTTCC
ACACCTCAGATTTATAACGAAGGCGAAGATAGTCTCTCACCTTATATCAAGATTCTCCAAAAAATGGGGCTGAAATCCGA
AGAACGTGGTCGGATTAAAACACTTAGTCCGCAAGACATAGGTCACTACAAGAGTCTCTTATCCCGTTTGATTGAGTCGG
AAAGACCAAGCCTTGAAACAGAGGAGTGGGAAGGGCAGAGGGCCTTCTGGACAGTATTGGTTCGCCATTTGAAGAAGAAA
TTGGAGTCGCAAGGCATTGAAATTCCGACCATTACTGGTGATATTGCTTCTAAACAACTTTCAGATGAAACCTTGGCTGC
TTTATATCCAGAGGATAAGCCCCTCAATCTTTCTGCATCCAGCTTGACCAATTTCTACAATAACCAATATCTTTACTTTG
TACACAATGTGCTTCGCTTGCGGGAACAGGAATCCATCCATCCGACGGCCTTTCAACACGGGCTCTTCTTGCATCGGATT
TTTGAACGAGTGGTCATGGACCAATCTGAACTAGATTTTGATCAAAAAGTGGACAAGGCCATTCTGCGTACACGTGACGA
GGCAGAATTTGCTATGTTTTATAACCAAGATGCGGATGCTCGCTATACGGAGGAGGTGCTGGATAAGATTGCTCGTTCCA
GTGCGACTATTTTGCGGGATAATGATTTGGTGGAAATTGATGGCCAGGAAAAGAGTTTCCGTCAGGATAAGGCGCTAGTT
TTTGACCTTCAAAATGGCAAGAGTGTGCATGTAAATGGTACCATTGACCGCTTGGATACCTTACAAATTAATCAGGCTGT
CGGTGTTGTGGATTACAAGTCCAGTGACCAATCTTTTTCAGTTGGGGATTTTTACAATGGTCTAAAACCTCAGTTGGTGA
CCTACTTGGCAGCCTTACAAGAGCTGGATGAAACCAAGGATAAACCTGTTTTTGGAGCTATGTATTTGCATTTGCAGGAT
CCGATTATCAAATTAAAAGACACGAAGAATTTAGAACAGCTAGAAGGAGCTGCCAATACTAGCTTGGTTTACAAGGGGCT
TTTCTTGAAGGAGGAAAGTCTGGGGCTCAATCATTTTTATCAGACTCGTAACCAACTCTACACGGAAGATGAGTTTGCGG
TTTTATTGAACCACAACCAAGAACTATACAAACAAGCTGCCATGGACATTCTGGCTGGTCGCTTTGCTATTAACCCTTAT
ACAAAAGATGGGCGTTCGGTGGCAGGTGAGCAGCTGAAGGCAATCACTGGTTTTGAGGCGGATCGGCACATGGGCATGGC
GCGGCGGTTGGTCAAGGAGGCCAAGCGTCAAGATTGGATGGAACGAATGAAAGGAGGTCCGGACTAA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (757-1041)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexB	Streptococcus pneumoniae R6	44.968	100	0.456