Detailed information NTG0682290

Bioinformatically predicted

Overview

• Name: rexB
• Type: Machinery gene
• Locus tag: OHM52_RS08580
• Genome accession: NZ_CP109937
• Coordinates: 1708315..1711581 (-)
• Length: 1088 a.a.
• NCBI ID: WP_029178565.1
• Uniprot ID: -
• Organism: Streptococcus suis strain TRG6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1703315..1716581

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHM52_RS08570 (OHM52_08570)	plsY	1704008..1704652 (+)	645	WP_009909724.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	-
OHM52_RS08575 (OHM52_08575)	rexA	1704662..1708315 (-)	3654	WP_024394348.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
OHM52_RS08580 (OHM52_08580)	rexB	1708315..1711581 (-)	3267	WP_029178565.1	ATP-dependent nuclease subunit B	Machinery gene
OHM52_RS08585 (OHM52_08585)	-	1711872..1715630 (-)	3759	WP_217468003.1	MucBP domain-containing protein	-
OHM52_RS08590 (OHM52_08590)	-	1716024..1716188 (-)	165	WP_024381780.1	hypothetical protein	-

Sequence

Protein

• Length: 1088 a.a.
• Molecular weight: 124536.89 Da
• Isoelectric Point: 5.1283

>NTDB_id=682290 OHM52_RS08580 WP_029178565.1 1708315..1711581(-) (rexB) [Streptococcus suis strain TRG6]
MKLVYTDIRNPLTQYLTDTSAEFAKEAKRVFYIAPNSLSFEMERKVLEYLPEQATFDIIVTRFGQLARYLMIDRKEAGQP
LDDVGLAMIFFRVLSQFEDGDLKVYGRLQRDFGFINQLVALYKELQRANMSILDLEAMDSPDKQADLVKIFLAVTDILSK
ESFEHQSKLAQLTGLVETGQLDEQLKNIVLVVDGFSRFSAEEEALVSALNERVSEILIGVYASKKAVQVIYAEGNVYQAN
VDFLRQLSAQFQTKATYIGQEPVLDSIGKFSKNMEAYYDYSGTMIDLTPADQEKIQLWEVVNQKEEVEQVATAIRQHIHQ
GARYKDILLLLGDVDSYKLQIGKIFDKYDIPYYFGKAEEMSHHPLVHFVESLERLRRYRFRAEDLLNLLKSGLYASISQK
ELDLFESYILFADMKGQAAFSRAFVANSRADYDTEVIKEKRLVYDLNVLEPLRAKIMEPLNQLFKAGPQSGAALLEKFMA
FLEAIELPKNMEKMSRNLSEVEQEKEEQVWKSFTHLLENFHQIFGKEKLKMDDFLAILQAGMQASHYRTVPATVDVVNVK
SYDLIEPHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEKVNLVSASSSRFDLVSRENIKKNHAAMMSLLNAATEQLVIS
TPQIYNEGEDSLSPYIKILQKMGLKSEERGRIKTLSPQDIGHYKSLLSRLIESERPSLETEEWEGQRAFWTVLVRHLKKK
LESQGIEIPTITGDIASKQLSDETLAALYPEDKPLNLSASSLTNFYNNQYLYFVHNVLRLREQESIHPTAFQHGLFLHRI
FERVVMDQSELDFDQKVDKAILRTRDEAEFAMFYNQDADARYTEEVLDKIARSSATILRDNDLVEIDGQEKSFRQDKALV
FDLQNGKSVHVNGTIDRLDTLQINQAVGVVDYKSSDQSFSVGDFYNGLKPQLVTYLAALQELDETKDKPVFGAMYLHLQD
PIIKLKDTKNLEQLEGAANTSLVYKGLFLKEESLGLNHFYQTRNQLYTEDEFAVLLNHNQELYKQAAMDILAGRFAINPY
TKDGRSVAGEQLKAITGFEADRHMGMARRLVKEAKRQDWMERMKGGPD

Nucleotide

• Length: 3267 bp

>NTDB_id=682290 OHM52_RS08580 WP_029178565.1 1708315..1711581(-) (rexB) [Streptococcus suis strain TRG6]
ATGAAATTAGTCTATACAGATATTCGCAATCCTCTGACGCAGTATTTAACGGATACCTCGGCAGAATTTGCTAAGGAAGC
TAAGCGAGTTTTTTATATTGCTCCAAACTCTCTATCCTTTGAGATGGAACGCAAGGTCTTGGAATACCTGCCAGAACAGG
CAACTTTTGATATTATCGTGACCCGTTTTGGGCAATTGGCCCGCTATTTGATGATTGATAGGAAAGAAGCAGGTCAACCG
CTGGATGATGTTGGTCTGGCAATGATTTTCTTTCGTGTTCTATCGCAATTTGAAGATGGCGACTTGAAAGTCTATGGTCG
TTTGCAGAGAGATTTTGGTTTCATTAACCAGCTAGTTGCTTTATACAAAGAATTGCAACGGGCAAATATGTCTATTTTGG
ACTTGGAAGCCATGGACTCACCAGATAAGCAGGCTGATTTGGTAAAGATTTTTCTGGCTGTAACAGACATTTTGTCCAAA
GAAAGCTTTGAGCATCAGTCTAAGTTAGCACAGTTGACTGGCTTGGTAGAAACTGGTCAGTTGGATGAGCAGTTGAAGAA
CATTGTGCTGGTGGTAGACGGATTTTCTCGTTTTTCGGCAGAAGAAGAAGCTTTAGTAAGTGCTTTAAATGAACGGGTGT
CGGAAATCCTAATTGGTGTATATGCCAGCAAGAAAGCTGTGCAAGTCATCTATGCGGAAGGCAATGTCTATCAAGCCAAC
GTTGACTTTTTACGTCAGCTATCAGCGCAGTTCCAGACTAAGGCTACTTATATTGGTCAAGAGCCAGTCTTGGACAGTAT
TGGTAAATTTTCAAAGAATATGGAAGCCTATTATGACTACAGCGGGACCATGATAGACTTGACTCCAGCAGATCAAGAAA
AAATCCAGCTATGGGAAGTCGTTAACCAAAAAGAAGAGGTGGAGCAGGTAGCAACGGCAATTCGCCAACACATACACCAA
GGAGCTCGCTATAAAGACATCTTGTTGCTCTTGGGTGATGTGGATAGCTACAAGTTGCAGATTGGCAAAATTTTTGACAA
ATATGATATTCCCTACTATTTTGGTAAGGCAGAGGAGATGAGCCATCATCCCCTAGTCCACTTTGTGGAGTCCTTGGAGC
GCTTGCGTCGCTATCGTTTCCGTGCGGAAGACCTGCTCAATCTCCTCAAATCTGGTTTGTACGCCAGCATTTCCCAAAAG
GAGCTGGACTTGTTTGAGTCCTACATCCTCTTTGCGGATATGAAGGGGCAGGCTGCTTTTTCGAGGGCTTTTGTGGCCAA
TAGCAGAGCTGACTATGACACTGAAGTTATTAAGGAGAAAAGACTTGTCTATGATTTGAATGTTTTGGAACCCCTACGTG
CTAAGATTATGGAACCTTTGAACCAGTTGTTTAAGGCTGGACCACAATCTGGAGCAGCCTTGCTTGAGAAATTTATGGCT
TTTTTGGAGGCAATTGAGCTTCCTAAAAATATGGAAAAAATGTCTCGAAATTTGAGCGAAGTAGAGCAAGAAAAAGAAGA
GCAGGTCTGGAAAAGTTTTACCCATCTTCTTGAGAATTTTCATCAGATTTTCGGAAAAGAAAAGTTGAAAATGGATGATT
TTCTGGCTATTTTACAGGCTGGTATGCAGGCCAGCCACTATCGTACCGTTCCTGCAACGGTTGATGTGGTCAATGTCAAA
TCCTATGATTTGATCGAGCCACACACTGCAAAGTATGTTTATGCTATCGGAATGGGACAGTCCAATTTTCCAAAAGTTGC
CAAGAATACCAGTCTATTGACGGAAGAAGAGATGGAAAAAGTCAATCTTGTTTCAGCTAGTTCTTCACGTTTTGATTTGG
TCAGCCGAGAGAATATCAAGAAGAACCATGCTGCCATGATGTCTCTGCTTAATGCTGCGACGGAACAGTTAGTTATTTCC
ACACCTCAGATTTATAACGAAGGCGAAGATAGTCTCTCACCTTATATCAAGATTCTCCAAAAAATGGGGCTGAAATCCGA
AGAACGTGGTCGGATTAAAACACTTAGTCCGCAAGACATAGGTCACTACAAGAGTCTCTTATCCCGTTTGATTGAGTCGG
AAAGACCAAGCCTTGAAACAGAGGAGTGGGAAGGGCAGAGGGCCTTCTGGACAGTATTGGTTCGCCATTTGAAGAAGAAA
TTGGAGTCGCAAGGCATTGAAATTCCGACCATTACTGGTGATATTGCTTCTAAACAACTTTCAGATGAAACCTTGGCTGC
TTTATATCCAGAGGATAAGCCCCTCAATCTTTCTGCATCCAGCTTGACCAATTTCTACAATAACCAATATCTTTACTTTG
TACACAATGTGCTTCGCTTGCGGGAACAGGAATCCATCCATCCGACGGCCTTTCAACACGGGCTCTTCTTGCATCGGATT
TTTGAACGAGTGGTCATGGACCAATCTGAACTAGATTTTGATCAAAAAGTGGACAAGGCCATTCTGCGTACACGTGACGA
GGCAGAATTTGCTATGTTTTATAACCAAGATGCGGATGCTCGCTATACGGAGGAGGTGCTGGATAAGATTGCTCGTTCCA
GTGCGACTATTTTGCGGGATAATGATTTGGTGGAAATTGATGGCCAGGAAAAGAGTTTCCGTCAGGATAAGGCGCTAGTT
TTTGACCTTCAAAATGGCAAGAGTGTGCATGTAAATGGTACCATTGACCGCTTGGATACCTTACAAATTAATCAGGCTGT
CGGTGTTGTGGATTACAAGTCCAGTGACCAATCTTTTTCAGTTGGGGATTTTTACAATGGTCTAAAACCTCAGTTGGTGA
CCTACTTGGCAGCCTTACAAGAGCTGGATGAAACCAAGGATAAACCTGTTTTTGGAGCTATGTATTTGCATTTGCAGGAT
CCGATTATCAAATTAAAAGACACGAAGAATTTAGAACAGCTAGAAGGAGCTGCCAATACTAGCTTGGTTTACAAGGGGCT
TTTCTTGAAGGAGGAAAGTCTGGGGCTCAATCATTTTTATCAGACTCGTAACCAACTCTACACGGAAGATGAGTTTGCGG
TTTTATTGAACCACAACCAAGAACTATACAAACAAGCTGCCATGGACATTCTGGCTGGTCGCTTTGCTATTAACCCTTAT
ACAAAAGATGGGCGTTCGGTGGCAGGTGAGCAGCTGAAGGCAATCACTGGTTTTGAGGCGGATCGGCACATGGGCATGGC
GCGGCGGTTGGTCAAGGAGGCCAAGCGTCAAGATTGGATGGAACGAATGAAAGGAGGTCCGGACTAA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (757-1041)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexB	Streptococcus pneumoniae R6	44.968	100	0.456