Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   NT398_RS03470 Genome accession   NZ_CP109933
Coordinates   692463..693086 (+) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain SASWT1215     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 687463..698086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NT398_RS03440 (NT398_03440) - 688436..688903 (-) 468 WP_000966142.1 CcdC family protein -
  NT398_RS03445 (NT398_03445) - 688997..689095 (-) 99 WP_001789897.1 hypothetical protein -
  NT398_RS03450 (NT398_03450) - 689082..689324 (-) 243 WP_000246909.1 YneF family protein -
  NT398_RS03455 (NT398_03455) recP/tkt 689602..691590 (-) 1989 WP_000481443.1 transketolase Machinery gene
  NT398_RS03460 (NT398_03460) - 691711..691950 (-) 240 WP_000071351.1 DUF896 domain-containing protein -
  NT398_RS03465 (NT398_03465) sosA 692087..692320 (-) 234 WP_000499650.1 DNA damage-induced cell division inhibitor SosA -
  NT398_RS03470 (NT398_03470) dinR/lexA 692463..693086 (+) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  NT398_RS03475 (NT398_03475) - 693466..694482 (-) 1017 WP_284592457.1 CAP domain-containing protein -
  NT398_RS03480 (NT398_03485) guaC 694504..695481 (-) 978 WP_042108939.1 GMP reductase -
  NT398_RS03485 (NT398_03490) rpsN 695638..695907 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  NT398_RS03490 (NT398_03495) rpmG 696361..696510 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=682162 NT398_RS03470 WP_001208755.1 692463..693086(+) (dinR/lexA) [Staphylococcus aureus strain SASWT1215]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=682162 NT398_RS03470 WP_001208755.1 692463..693086(+) (dinR/lexA) [Staphylococcus aureus strain SASWT1215]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCATCTTTCACGTCTTGAAGAAAAAG
GATATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCTGTAGAAAATATTGAAGAGTATTT
TCCATTACCTGAACACTTAACATCGACACATAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657