Detailed information NTG0682143

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: M1M80_RS19555
• Genome accession: NZ_CP096592
• Coordinates: 3857522..3858667 (+)
• Length: 381 a.a.
• NCBI ID: WP_003235896.1
• Uniprot ID: A0A9W5LLN8
• Organism: Bacillus inaquosorum strain A65.1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3852522..3863667

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M1M80_RS19535 (M1M80_19535)	-	3852530..3853810 (+)	1281	WP_060399737.1	pitrilysin family protein	-
M1M80_RS19540 (M1M80_19540)	-	3853807..3854508 (+)	702	WP_060399738.1	hypothetical protein	-
M1M80_RS19545 (M1M80_19545)	-	3854515..3855891 (-)	1377	WP_060399739.1	YncE family protein	-
M1M80_RS19550 (M1M80_19550)	-	3855931..3857292 (-)	1362	WP_060399740.1	YncE family protein	-
M1M80_RS19555 (M1M80_19555)	rapF	3857522..3858667 (+)	1146	WP_003235896.1	response regulator aspartate phosphatase RapF	Regulator
M1M80_RS19560 (M1M80_19560)	phrF	3858651..3858770 (+)	120	WP_003222023.1	phosphatase RapF inhibitor PhrF	Regulator
M1M80_RS19565 (M1M80_19565)	-	3858869..3859331 (+)	463	Protein_3804	YbaK/EbsC family protein	-
M1M80_RS19570 (M1M80_19570)	speB	3859364..3860236 (-)	873	WP_060399742.1	agmatinase	-
M1M80_RS19575 (M1M80_19575)	speE	3860297..3861127 (-)	831	WP_003235914.1	spermidine synthase	-
M1M80_RS19580 (M1M80_19580)	-	3861329..3863404 (+)	2076	WP_060399743.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.00 Da
• Isoelectric Point: 5.1475

>NTDB_id=682143 M1M80_RS19555 WP_003235896.1 3857522..3858667(+) (rapF) [Bacillus inaquosorum strain A65.1]
MTGVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFKKAYSMAEAENQPQLMGRTLYNIGLCKNSQSQYED
AVTYFKRAIAVFEESNIIPSLPQAYFLITQIHYKMGKMDKAHAYHSKGMAYSQKAGDSIYLSEFEFLKSLYLSGPDEEAI
QSFFDFLESKMLYADLEDFALDVAKYYHERENFQKASAYFLKVEQVRQLIQGGVRLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=682143 M1M80_RS19555 WP_003235896.1 3857522..3858667(+) (rapF) [Bacillus inaquosorum strain A65.1]
GTGACAGGTGTCATATCTTCTTCTTCCGTCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
TGATGCAGAATATTTGCGAAGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAATTCCGGCACAACCTGATGCTTGAGTACCTTGAACCGCTAGAAAAAATGCGGATCGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGAGTCCTTGATTATTACTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTTAAAAAGGCCGAAAGCAAGTTGATATTCG
TTAAGGATCGAATAGAGAAGGCAGAGTTTTTCTTTAAAATGTCTGAGTCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAGGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTTCAGTGTCACTCTTT
ATTTGCTACCAATTTCTTAGATCTGAAACAATATGAGGATGCCATATCACATTTTAAAAAAGCTTACTCTATGGCGGAAG
CTGAGAATCAGCCCCAATTAATGGGAAGAACATTGTACAACATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCGTAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCTAATATTATACCTTCCCTGCCCCAAGCCTATTTTTT
AATTACACAAATTCATTATAAAATGGGAAAAATGGATAAAGCCCATGCATATCATAGTAAGGGAATGGCTTATTCTCAAA
AGGCCGGAGATTCAATATATTTATCGGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCTGATGAAGAAGCAATT
CAAAGTTTCTTTGATTTCCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTCTTGATGTGGCAAAATATTA
TCATGAACGTGAAAATTTTCAAAAAGCTTCTGCTTATTTCCTAAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGATTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-207)

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	95.801	100	0.958
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572