Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   M1M80_RS07910 Genome accession   NZ_CP096592
Coordinates   1601020..1601604 (+) Length   194 a.a.
NCBI ID   WP_003238902.1    Uniprot ID   A0A9Q4HW25
Organism   Bacillus inaquosorum strain A65.1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1596020..1606604
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M1M80_RS07880 (M1M80_07880) dapD 1596203..1596913 (+) 711 WP_060398523.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  M1M80_RS07885 (M1M80_07885) - 1596983..1598107 (+) 1125 WP_060398524.1 N-acetyldiaminopimelate deacetylase -
  M1M80_RS07890 (M1M80_07890) - 1598168..1598413 (+) 246 WP_003238909.1 YkuS family protein -
  M1M80_RS07895 (M1M80_07895) mscT 1598450..1599253 (-) 804 WP_060400020.1 small-conductance mechanosensitive channel protein MscT -
  M1M80_RS07900 (M1M80_07900) ahpA 1599497..1600039 (+) 543 WP_003238905.1 biofilm-specific peroxidase AhpA -
  M1M80_RS07905 (M1M80_07905) - 1600109..1600567 (+) 459 WP_060398525.1 redoxin domain-containing protein -
  M1M80_RS07910 (M1M80_07910) rok 1601020..1601604 (+) 585 WP_003238902.1 transcriptional regulator Rok Regulator
  M1M80_RS07915 (M1M80_07915) - 1601646..1602611 (-) 966 WP_060398526.1 hypothetical protein -
  M1M80_RS07920 (M1M80_07920) - 1602747..1603346 (+) 600 WP_060398527.1 molybdenum cofactor guanylyltransferase -
  M1M80_RS07925 (M1M80_07925) - 1603397..1604416 (+) 1020 WP_060398528.1 molybdopterin-synthase adenylyltransferase MoeB -
  M1M80_RS07930 (M1M80_07930) glp 1604434..1605726 (+) 1293 WP_060398529.1 gephyrin-like molybdotransferase Glp -
  M1M80_RS07935 (M1M80_07935) mobB 1605687..1606208 (+) 522 WP_060398530.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22145.10 Da        Isoelectric Point: 9.7169

>NTDB_id=682101 M1M80_RS07910 WP_003238902.1 1601020..1601604(+) (rok) [Bacillus inaquosorum strain A65.1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEVKKDFRSERKTDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=682101 M1M80_RS07910 WP_003238902.1 1601020..1601604(+) (rok) [Bacillus inaquosorum strain A65.1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTACGATTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATCGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAGTCAAAAAGGATTTCC
GTTCTGAACGAAAAACTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAACAGCAGTCTGTACAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCTGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCGAAAGCAGCTAAGCTGCGTGAAGCTGCCATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGTGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCGTATCGCGGCCAGTACATTTTAGAAGGTGAAATCGAATCAGCTGA
ATCTGCAGAATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

98.413

97.423

0.959