Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   M1M80_RS06360 Genome accession   NZ_CP096592
Coordinates   1321479..1321670 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus inaquosorum strain A65.1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1316479..1326670
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M1M80_RS06330 (M1M80_06330) argF 1317339..1318283 (+) 945 WP_060398367.1 ornithine carbamoyltransferase -
  M1M80_RS06335 (M1M80_06335) - 1318385..1318564 (+) 180 WP_003239319.1 YjzC family protein -
  M1M80_RS06340 (M1M80_06340) - 1318610..1318795 (-) 186 WP_003224551.1 YjzD family protein -
  M1M80_RS06345 (M1M80_06345) - 1319047..1319781 (+) 735 WP_003239317.1 hypothetical protein -
  M1M80_RS06350 (M1M80_06350) - 1319863..1320420 (+) 558 WP_060398368.1 hypothetical protein -
  M1M80_RS06355 (M1M80_06355) med 1320511..1321464 (+) 954 WP_019258048.1 transcriptional regulator Med Regulator
  M1M80_RS06360 (M1M80_06360) comZ 1321479..1321670 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  M1M80_RS06365 (M1M80_06365) - 1321700..1321927 (-) 228 WP_080010764.1 hypothetical protein -
  M1M80_RS06370 (M1M80_06370) fabH 1322091..1323029 (+) 939 WP_060398369.1 beta-ketoacyl-ACP synthase III -
  M1M80_RS06375 (M1M80_06375) fabF 1323052..1324293 (+) 1242 WP_060398370.1 beta-ketoacyl-ACP synthase II -
  M1M80_RS06380 (M1M80_06380) - 1324370..1325155 (+) 786 WP_060398371.1 DUF2268 domain-containing protein -
  M1M80_RS06385 (M1M80_06385) appD 1325344..1326330 (+) 987 WP_060398372.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=682092 M1M80_RS06360 WP_003224559.1 1321479..1321670(+) (comZ) [Bacillus inaquosorum strain A65.1]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=682092 M1M80_RS06360 WP_003224559.1 1321479..1321670(+) (comZ) [Bacillus inaquosorum strain A65.1]
ATGCAGCACGAAAAATCACTGGAGTTCTTGCAAATTGCCATGAAATATCTGCCTGAAGCGAAAGAACAGCTTGAAAAATC
AGGCATTGAGCTGTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGATGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1