Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   M1M80_RS02010 Genome accession   NZ_CP096592
Coordinates   390065..390205 (+) Length   46 a.a.
NCBI ID   WP_225516634.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain A65.1     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 385065..395205
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M1M80_RS02005 (M1M80_02005) srfAB 386929..390021 (+) 3093 Protein_351 surfactin non-ribosomal peptide synthetase SrfAB -
  M1M80_RS02010 (M1M80_02010) comS 390065..390205 (+) 141 WP_225516634.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5274.07 Da        Isoelectric Point: 9.2422

>NTDB_id=682078 M1M80_RS02010 WP_225516634.1 390065..390205(+) (comS) [Bacillus inaquosorum strain A65.1]
MNRSSKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=682078 M1M80_RS02010 WP_225516634.1 390065..390205(+) (comS) [Bacillus inaquosorum strain A65.1]
TTGAACCGATCAAGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTTTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978