Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   M0696_RS07685 Genome accession   NZ_CP096590
Coordinates   1500770..1501234 (-) Length   154 a.a.
NCBI ID   WP_019714223.1    Uniprot ID   -
Organism   Bacillus rugosus strain A78.1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1495770..1506234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0696_RS07665 (M0696_07665) kinA 1496238..1498058 (+) 1821 WP_166853303.1 sporulation histidine kinase KinA -
  M0696_RS07670 (M0696_07670) - 1498068..1499249 (-) 1182 WP_222142738.1 aminotransferase A -
  M0696_RS07675 (M0696_07675) - 1499450..1499611 (-) 162 WP_019714221.1 hypothetical protein -
  M0696_RS07680 (M0696_07680) cheV 1499818..1500729 (+) 912 WP_019714222.1 chemotaxis protein CheV -
  M0696_RS07685 (M0696_07685) kre 1500770..1501234 (-) 465 WP_019714223.1 YkyB family protein Regulator
  M0696_RS07690 (M0696_07690) - 1501361..1502653 (-) 1293 WP_019714224.1 MFS transporter -
  M0696_RS07695 (M0696_07695) - 1502729..1503223 (-) 495 WP_248602763.1 L,D-transpeptidase family protein -
  M0696_RS07700 (M0696_07700) - 1503280..1504140 (-) 861 WP_019714226.1 metallophosphoesterase -
  M0696_RS07705 (M0696_07705) fadH 1504283..1505047 (+) 765 WP_222142739.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17881.68 Da        Isoelectric Point: 10.3545

>NTDB_id=681947 M0696_RS07685 WP_019714223.1 1500770..1501234(-) (kre) [Bacillus rugosus strain A78.1]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQDYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=681947 M0696_RS07685 WP_019714223.1 1500770..1501234(-) (kre) [Bacillus rugosus strain A78.1]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTTAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTGTTGCAAGACTATGTCGGCATGAAAGAAAAACCGCTTGTGC
CAAATCGCCAGCAGCCAGCTTATCATAAACCTGTTTTTAAAAAGCTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

99.351

100

0.994