Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   M0696_RS04770 Genome accession   NZ_CP096590
Coordinates   962804..963595 (+) Length   263 a.a.
NCBI ID   WP_019713681.1    Uniprot ID   -
Organism   Bacillus rugosus strain A78.1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 957804..968595
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0696_RS04740 (M0696_04740) - 958643..959674 (+) 1032 WP_222143830.1 iron ABC transporter permease -
  M0696_RS04745 (M0696_04745) - 959789..960670 (+) 882 WP_019713677.1 PhzF family phenazine biosynthesis isomerase -
  M0696_RS04750 (M0696_04750) - 960757..961341 (+) 585 WP_166853859.1 nitroreductase -
  M0696_RS04755 (M0696_04755) - 961380..961571 (-) 192 WP_148963659.1 YfhD family protein -
  M0696_RS04760 (M0696_04760) - 961638..961748 (-) 111 WP_003223230.1 YfhE family protein -
  M0696_RS04765 (M0696_04765) - 961804..962715 (-) 912 WP_222143831.1 TIGR01777 family oxidoreductase -
  M0696_RS04770 (M0696_04770) recX 962804..963595 (+) 792 WP_019713681.1 recombination regulator RecX Regulator
  M0696_RS04775 (M0696_04775) - 963604..963924 (+) 321 WP_019713682.1 YfhH family protein -
  M0696_RS04780 (M0696_04780) - 964062..965255 (+) 1194 WP_019713683.1 MFS transporter -
  M0696_RS04785 (M0696_04785) - 965290..965442 (-) 153 WP_010333452.1 small, acid-soluble spore protein K -
  M0696_RS04790 (M0696_04790) - 965567..965836 (+) 270 WP_019713684.1 YfhJ family protein -
  M0696_RS04795 (M0696_04795) - 965979..966500 (+) 522 WP_166853855.1 SH3 domain-containing protein -
  M0696_RS04800 (M0696_04800) - 966582..966914 (+) 333 WP_222143832.1 SdpI family protein -
  M0696_RS04805 (M0696_04805) - 966901..967761 (+) 861 WP_222143833.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30859.02 Da        Isoelectric Point: 6.0925

>NTDB_id=681930 M0696_RS04770 WP_019713681.1 962804..963595(+) (recX) [Bacillus rugosus strain A78.1]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVKFELEKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSAPVIAEVIHKLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=681930 M0696_RS04770 WP_019713681.1 962804..963595(+) (recX) [Bacillus rugosus strain A78.1]
ATGCCATTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATCTTTTTGGATGAAAAATACGCCTT
CAGTGTGGACGCGGACGTGCTCGTGAAATTTGAGCTTGAAAAGGGAAAAGAGCTTGATGACCTTGACATCATTGAGATTC
AATACGGGGACGAAGTGAAAAAAGGCTTCAACCGTGCGCTTGATTTTTTATCCTACCGAATGAGGTCAACGAAAGAGGTA
GAGGACCACTTAAAGAAAAAAGAAACATCGGCGCCCGTCATTGCAGAAGTCATCCATAAGCTCAATGACTATAAGTACTT
AAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCATAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAG
AGCTGAGAGCGAAGGGGATCGATGACGATACAATTAAGGAGGCGCTGAGTTCCTTTTCCTTTGAAGATCAGACGAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTCAAACAGCGCGCCCAGATGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTCATCAGCGCGGCGCTTGAGCAGATTGAGTATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCTGAAAAAGCGTTTAGAAAATATCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGTAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

96.958

100

0.97