Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | M0696_RS00245 | Genome accession | NZ_CP096590 |
| Coordinates | 44445..44735 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus rugosus strain A78.1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39445..49735
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M0696_RS00205 (M0696_00205) | darA | 39468..39797 (+) | 330 | WP_003218295.1 | cyclic di-AMP receptor DarA | - |
| M0696_RS00210 (M0696_00210) | - | 39810..40250 (+) | 441 | WP_166854541.1 | YaaR family protein | - |
| M0696_RS00215 (M0696_00215) | holB | 40262..41251 (+) | 990 | WP_222143878.1 | DNA polymerase III subunit delta' | - |
| M0696_RS00220 (M0696_00220) | ricT | 41254..42081 (+) | 828 | WP_014112290.1 | competence/sporulation regulator complex protein RicT | - |
| M0696_RS00225 (M0696_00225) | yabA | 42096..42455 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| M0696_RS00230 (M0696_00230) | - | 42514..43257 (+) | 744 | WP_003218310.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| M0696_RS00235 (M0696_00235) | - | 43244..43543 (+) | 300 | WP_222143877.1 | GIY-YIG nuclease family protein | - |
| M0696_RS00240 (M0696_00240) | rsmI | 43518..44396 (+) | 879 | WP_166854538.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| M0696_RS00245 (M0696_00245) | abrB | 44445..44735 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| M0696_RS00250 (M0696_00250) | metG | 45229..47223 (+) | 1995 | WP_222143876.1 | methionine--tRNA ligase | - |
| M0696_RS00255 (M0696_00255) | - | 47302..48069 (+) | 768 | WP_222143875.1 | TatD family hydrolase | - |
| M0696_RS00260 (M0696_00260) | - | 48225..49538 (+) | 1314 | WP_222143874.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=681919 M0696_RS00245 WP_003226760.1 44445..44735(-) (abrB) [Bacillus rugosus strain A78.1]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=681919 M0696_RS00245 WP_003226760.1 44445..44735(-) (abrB) [Bacillus rugosus strain A78.1]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAATTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGACGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAATTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGACGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |