Detailed information NTG0681916

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: N8A71_RS23460
• Genome accession: NZ_CP109929
• Coordinates: 4917589..4918614 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli O6:K2:H1 strain C 691-04A
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4912589..4923614

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N8A71_RS23440 (N8A71_23440)	metJ	4913774..4914091 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
N8A71_RS23445 (N8A71_23445)	yiiX	4914151..4914759 (+)	609	WP_000702296.1	YiiX family permuted papain-like enzyme	-
N8A71_RS23450 (N8A71_23450)	rpmE	4914820..4915032 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
N8A71_RS23455 (N8A71_23455)	priA	4915235..4917433 (+)	2199	WP_001305041.1	primosomal protein N'	Machinery gene
N8A71_RS23460 (N8A71_23460)	cytR	4917589..4918614 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
N8A71_RS23465 (N8A71_23465)	ftsN	4918706..4919665 (+)	960	WP_000068846.1	cell division protein FtsN	-
N8A71_RS23470 (N8A71_23470)	hslV	4919758..4920288 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
N8A71_RS23475 (N8A71_23475)	hslU	4920298..4921629 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
N8A71_RS23480 (N8A71_23480)	menA	4921696..4922622 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
N8A71_RS23485 (N8A71_23485)	rraA	4922715..4923200 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
N8A71_RS23490 (N8A71_23490)	zapB	4923285..4923530 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=681916 N8A71_RS23460 WP_000644904.1 4917589..4918614(+) (cytR) [Escherichia coli O6:K2:H1 strain C 691-04A]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=681916 N8A71_RS23460 WP_000644904.1 4917589..4918614(+) (cytR) [Escherichia coli O6:K2:H1 strain C 691-04A]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628