Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   EFW11_RS03875 Genome accession   NZ_AP017623
Coordinates   760046..761719 (+) Length   557 a.a.
NCBI ID   WP_096397622.1    Uniprot ID   -
Organism   Enterococcus faecalis strain W11     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 755046..766719
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EFW11_RS03845 (EFW11_0721) - 755721..755951 (+) 231 WP_002355878.1 exodeoxyribonuclease VII small subunit -
  EFW11_RS03850 (EFW11_0722) - 755951..756832 (+) 882 WP_002355879.1 polyprenyl synthetase family protein -
  EFW11_RS03855 (EFW11_0723) - 756846..757661 (+) 816 WP_057086625.1 TlyA family RNA methyltransferase -
  EFW11_RS03860 (EFW11_0724) - 758025..758582 (+) 558 WP_096397621.1 matrixin family metalloprotease -
  EFW11_RS03865 (EFW11_0725) - 758587..759447 (+) 861 WP_218570689.1 hypothetical protein -
  EFW11_RS03870 (EFW11_0726) - 759579..760028 (+) 450 WP_002358881.1 arginine repressor -
  EFW11_RS03875 (EFW11_0727) recN 760046..761719 (+) 1674 WP_096397622.1 DNA repair protein RecN Machinery gene
  EFW11_RS13635 - 761810..761920 (-) 111 WP_002383399.1 DUF4044 domain-containing protein -
  EFW11_RS03885 (EFW11_0729) - 761988..762953 (-) 966 WP_002407538.1 magnesium transporter CorA family protein -
  EFW11_RS03890 - 763198..763590 (+) 393 WP_002383401.1 DUF3397 domain-containing protein -
  EFW11_RS03900 (EFW11_0730) mraZ 763824..764309 (+) 486 WP_002383402.1 division/cell wall cluster transcriptional repressor MraZ -
  EFW11_RS03905 (EFW11_0731) rsmH 764324..765280 (+) 957 WP_002355891.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  EFW11_RS03910 (EFW11_0732) ftsL 765297..765704 (+) 408 WP_002358883.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 557 a.a.        Molecular weight: 62665.06 Da        Isoelectric Point: 4.5772

>NTDB_id=68165 EFW11_RS03875 WP_096397622.1 760046..761719(+) (recN) [Enterococcus faecalis strain W11]
MLQELSVKNFAIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGGRGSSDYIRQGANKCTLEGLFSMPKSQELKKLL
EELGIETEEDSLVIQRDISASGKNVCRVNGRIVNITNLKRIGEYLVDIHGQNEHQELMQSERHIDMLDEFGGKKLLAVKE
KYTQAYQEYRALEAKVRKRQKNEKEFAQRMDMLHFQSDEIASAQLVAGEEEQLLEERNKLNNFQKIADALTISYAALNGE
DDSSLDKIGTSMNELASIESLDSEYKTLSDTVQNAYYLLQEASGDLSRLIDGLELDEGRLNEVENRLELIRQMKRKYGDS
IETILSYYEEITKELAEADFFEGGTGDLEALLAEKQQAAHQQALALRKERKRLAKELEQQILTELKELYLERTEFEVRFT
ELEHLQENGLDGVEFYITTNPGEPLKPLVRVASGGELSRVMLAMKTIFSQTQGITSIVFDEVDTGVSGRVAQAIADKIYQ
ISENSQVLCITHLPQVAAVADEHYFIEKEIVAGRTETSVRILSEKERVNEIARMLAGSEITKLTIEHAQELLAMAKK

Nucleotide


Download         Length: 1674 bp        

>NTDB_id=68165 EFW11_RS03875 WP_096397622.1 760046..761719(+) (recN) [Enterococcus faecalis strain W11]
ATGTTACAAGAACTTTCCGTGAAAAATTTTGCGATTATCTCTTCGCTACAATTAGAGTTTCAAATGGGTATGACCGTTTT
AACGGGAGAAACGGGTGCGGGGAAATCCATCATTATTGATGCAATGGGATTACTCACAGGCGGACGCGGATCCAGTGACT
ATATTCGTCAAGGAGCAAATAAATGCACCTTAGAAGGACTTTTTTCAATGCCGAAAAGTCAAGAATTAAAGAAATTATTA
GAAGAATTAGGTATTGAAACAGAAGAAGATTCTTTAGTGATTCAACGAGATATTTCCGCTTCTGGTAAAAATGTTTGCCG
TGTCAACGGACGGATTGTCAACATTACTAATTTAAAAAGAATTGGGGAATATTTAGTAGATATTCATGGCCAAAACGAAC
ATCAAGAATTGATGCAAAGTGAACGCCATATTGATATGTTAGATGAATTTGGTGGGAAAAAACTTTTAGCAGTCAAAGAA
AAATATACACAGGCGTATCAAGAGTATCGCGCACTCGAAGCCAAAGTCAGAAAGCGACAAAAAAATGAAAAAGAATTTGC
CCAAAGAATGGACATGCTTCATTTTCAAAGTGATGAAATTGCTAGTGCACAGTTAGTCGCTGGCGAAGAAGAACAATTGT
TAGAAGAACGCAATAAACTGAACAATTTTCAAAAGATTGCTGATGCACTGACGATTAGTTATGCCGCGCTAAATGGTGAA
GACGATAGTAGTTTGGATAAAATCGGAACAAGTATGAATGAACTCGCTTCGATTGAATCCCTTGATTCAGAATATAAAAC
ATTGTCAGATACTGTTCAAAATGCTTACTACTTACTACAAGAAGCCAGTGGAGATCTTTCTAGGTTGATTGATGGCTTAG
AACTAGACGAAGGCCGCTTGAATGAAGTAGAAAATCGTTTGGAATTAATCCGTCAAATGAAACGTAAATATGGCGATTCA
ATCGAAACGATTTTATCTTACTATGAAGAAATCACCAAAGAGTTAGCAGAGGCTGATTTTTTTGAAGGCGGTACAGGTGA
CTTAGAAGCGTTGCTTGCAGAGAAACAACAAGCGGCTCATCAACAAGCGTTAGCTTTACGAAAAGAACGAAAGCGCCTAG
CCAAAGAGCTTGAACAACAAATTTTAACCGAATTAAAAGAACTATATTTGGAGCGAACGGAATTTGAAGTCCGCTTTACA
GAACTTGAGCATTTACAAGAAAATGGCTTAGACGGAGTAGAATTTTATATTACTACTAACCCAGGGGAACCATTAAAACC
GTTAGTTCGGGTGGCTTCTGGCGGAGAACTTTCGCGAGTGATGTTGGCTATGAAAACAATCTTTTCTCAAACGCAAGGGA
TCACTAGTATTGTTTTTGATGAAGTGGATACAGGAGTTAGTGGCCGAGTAGCACAGGCGATTGCCGATAAAATTTATCAA
ATTTCAGAAAATTCGCAGGTGTTGTGTATCACGCACTTGCCACAAGTGGCGGCCGTTGCCGATGAACATTATTTTATTGA
AAAAGAAATTGTGGCGGGTCGGACAGAAACAAGCGTCCGAATTTTATCTGAAAAAGAGCGAGTAAACGAAATTGCGCGTA
TGCTCGCAGGAAGTGAAATTACGAAATTAACCATTGAACATGCACAAGAGCTGTTGGCGATGGCGAAAAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

48.691

100

0.501

Multiple sequence alignment