Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | M1F50_RS07915 | Genome accession | NZ_CP096528 |
| Coordinates | 1636498..1636797 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain RIVM_M084986 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1631498..1641797
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M1F50_RS07890 (M1F50_07870) | gcvPA | 1632710..1634056 (-) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| M1F50_RS07895 (M1F50_07875) | gcvT | 1634076..1635167 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| M1F50_RS07900 (M1F50_07880) | - | 1635326..1635850 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| M1F50_RS07905 (M1F50_07885) | - | 1635840..1635986 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| M1F50_RS07910 (M1F50_07890) | comGF | 1636083..1636580 (-) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| M1F50_RS07915 (M1F50_07895) | comGE | 1636498..1636797 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| M1F50_RS07920 (M1F50_07900) | comGD | 1636784..1637230 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| M1F50_RS07925 (M1F50_07905) | comGC | 1637208..1637519 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| M1F50_RS07930 (M1F50_07910) | comGB | 1637533..1638603 (-) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| M1F50_RS07935 (M1F50_07915) | comGA | 1638575..1639549 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| M1F50_RS07940 (M1F50_07920) | - | 1639601..1640224 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| M1F50_RS07945 (M1F50_07925) | - | 1640221..1640550 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| M1F50_RS07950 (M1F50_07930) | - | 1640550..1641536 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| M1F50_RS07955 (M1F50_07935) | - | 1641533..1641736 (-) | 204 | WP_000087559.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=681516 M1F50_RS07915 WP_000844413.1 1636498..1636797(-) (comGE) [Staphylococcus aureus strain RIVM_M084986]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=681516 M1F50_RS07915 WP_000844413.1 1636498..1636797(-) (comGE) [Staphylococcus aureus strain RIVM_M084986]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |