Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | CPZ03_RS11220 | Genome accession | NZ_AP017617 |
| Coordinates | 2188484..2189113 (-) | Length | 209 a.a. |
| NCBI ID | WP_000839133.1 | Uniprot ID | A0A1M2IUY6 |
| Organism | Escherichia coli strain MRY15-117 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2183484..2194113
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPZ03_RS11205 (MRY15117_c20450) | helD | 2183726..2185780 (-) | 2055 | WP_001361412.1 | DNA helicase IV | - |
| CPZ03_RS11210 (MRY15117_c20460) | yccF | 2185903..2186349 (+) | 447 | WP_001261235.1 | YccF domain-containing protein | - |
| CPZ03_RS11215 (MRY15117_c20470) | yccS | 2186359..2188521 (+) | 2163 | WP_000875039.1 | YccS family putative transporter | - |
| CPZ03_RS11220 (MRY15117_c20480) | sxy/tfoX | 2188484..2189113 (-) | 630 | WP_000839133.1 | CRP-S regulon transcriptional coactivator Sxy | Regulator |
| CPZ03_RS11225 (MRY15117_c20490) | sulA | 2189331..2189840 (+) | 510 | WP_000288691.1 | SOS-induced cell division inhibitor SulA | - |
| CPZ03_RS11235 (MRY15117_c20500) | ompA | 2190197..2191249 (+) | 1053 | WP_001346420.1 | porin OmpA | - |
| CPZ03_RS11240 (MRY15117_c20510) | matP | 2191327..2191779 (-) | 453 | WP_000877161.1 | macrodomain Ter protein MatP | - |
| CPZ03_RS11245 (MRY15117_c20520) | ycbZ | 2191965..2193725 (+) | 1761 | WP_000156477.1 | Lon protease family protein | - |
Sequence
Protein
Download Length: 209 a.a. Molecular weight: 24161.04 Da Isoelectric Point: 9.2180
>NTDB_id=68115 CPZ03_RS11220 WP_000839133.1 2188484..2189113(-) (sxy/tfoX) [Escherichia coli strain MRY15-117]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTIDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTIDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
Nucleotide
Download Length: 630 bp
>NTDB_id=68115 CPZ03_RS11220 WP_000839133.1 2188484..2189113(-) (sxy/tfoX) [Escherichia coli strain MRY15-117]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGCAGTTACAGCCTGACCATTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAC
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTAGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGCAGTTACAGCCTGACCATTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAC
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTAGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
99.522 |
100 |
0.995 |