Detailed information NTG0680993

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: NQ150_RS03955
• Genome accession: NZ_CP109874
• Coordinates: 829178..830383 (-)
• Length: 401 a.a.
• NCBI ID: WP_001161843.1
• Uniprot ID: -
• Organism: Escherichia coli strain EC488
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 824178..835383

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQ150_RS03935 (NQ150_03935)	-	824247..825503 (+)	1257	WP_023063598.1	cytidylyltransferase domain-containing protein	-
NQ150_RS03940 (NQ150_03940)	neuC	825500..826675 (+)	1176	WP_023063599.1	UDP-N-acetylglucosamine 2-epimerase	-
NQ150_RS03945 (NQ150_03945)	-	826668..827816 (+)	1149	WP_033867317.1	DUF6716 putative glycosyltransferase	-
NQ150_RS03950 (NQ150_03950)	-	827806..829035 (+)	1230	WP_261630069.1	alpha-2,8-polysialyltransferase family protein	-
NQ150_RS03955 (NQ150_03955)	kpsS	829178..830383 (-)	1206	WP_001161843.1	capsule biosynthesis protein	Regulator
NQ150_RS03960 (NQ150_03960)	-	830418..832445 (-)	2028	WP_000579248.1	capsular polysaccharide biosynthesis protein	-
NQ150_RS03965 (NQ150_03965)	kdsB	832442..833182 (-)	741	WP_000030746.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
NQ150_RS03970 (NQ150_03970)	-	833192..834868 (-)	1677	WP_001301060.1	polysaccharide biosynthesis/export family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47841.16 Da
• Isoelectric Point: 10.1403

>NTDB_id=680993 NQ150_RS03955 WP_001161843.1 829178..830383(-) (kpsS) [Escherichia coli strain EC488]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPTPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNAVYYGGNTKNRQHNT
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=680993 NQ150_RS03955 WP_001161843.1 829178..830383(-) (kpsS) [Escherichia coli strain EC488]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTTCCCGGATGGTTACGGGATCTCCATCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGCTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTACGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGCCATGAGTTCCCTCGCTACCGCCACCATAA
ATCGTTTTCCCCCTGGTATGAAGCACGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTACCGAGGTTAATGAACGAGTTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTATATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCGCGTAAAGCGCCGAAAGA
AAGTTATTTGGTGATCAAACATCATCCGATGGATCGCGGTCACAGACTCTATCGACCATTAATTAAGCGGTTGAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCATGCTAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCAGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACCCAGGTTAATGCGGTTTATTATGGGGGGAACACAAAAAACCGCCAACATAATACA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387