Detailed information NTG0680713

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: PALA37_RS11080
• Genome accession: NZ_CP109850
• Coordinates: 2350406..2351431 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain PALA37
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2345406..2356431

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PALA37_RS11055 (PALA37_02195)	aroE	2345608..2346432 (-)	825	WP_003097314.1	shikimate dehydrogenase	-
PALA37_RS11060 (PALA37_02196)	hemF	2346490..2347407 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
PALA37_RS11065 (PALA37_02197)	-	2347598..2348575 (+)	978	WP_003097303.1	NADPH:quinone reductase	-
PALA37_RS11070 (PALA37_02198)	-	2348585..2349142 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
PALA37_RS11075 (PALA37_02199)	dprA	2349183..2350271 (-)	1089	WP_014602326.1	DNA-processing protein DprA	Machinery gene
PALA37_RS11080 (PALA37_02200)	tsaP	2350406..2351431 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
PALA37_RS11085 (PALA37_02201)	def	2351570..2352076 (+)	507	WP_003097293.1	peptide deformylase	-
PALA37_RS11090 (PALA37_02202)	fmt	2352132..2353076 (+)	945	WP_023095008.1	methionyl-tRNA formyltransferase	-
PALA37_RS11095 (PALA37_02203)	rsmB	2353073..2354377 (+)	1305	WP_270135315.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PALA37_RS11100 (PALA37_02204)	trkA	2354404..2355777 (+)	1374	WP_003111375.1	Trk system potassium transporter TrkA	-
PALA37_RS11105 (PALA37_02205)	-	2355926..2356243 (+)	318	WP_003097288.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=680713 PALA37_RS11080 WP_003097294.1 2350406..2351431(-) (tsaP) [Pseudomonas aeruginosa strain PALA37]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=680713 PALA37_RS11080 WP_003097294.1 2350406..2351431(-) (tsaP) [Pseudomonas aeruginosa strain PALA37]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGTCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGCGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTAGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGTGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393