Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   MZK46_RS13475 Genome accession   NZ_CP096209
Coordinates   2494857..2495807 (-) Length   316 a.a.
NCBI ID   WP_318539301.1    Uniprot ID   -
Organism   Terribacillus saccharophilus strain ZY-1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2489857..2500807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZK46_RS13450 - 2489948..2490715 (-) 768 WP_318539299.1 methyl-accepting chemotaxis protein -
  MZK46_RS13455 - 2491013..2492080 (+) 1068 WP_102707461.1 nitric oxide synthase oxygenase -
  MZK46_RS13460 - 2492124..2493065 (-) 942 WP_102707462.1 siderophore ABC transporter substrate-binding protein -
  MZK46_RS13465 - 2493162..2493917 (-) 756 WP_318539300.1 ATP-binding cassette domain-containing protein -
  MZK46_RS13470 - 2493914..2494864 (-) 951 WP_038564815.1 iron chelate uptake ABC transporter family permease subunit -
  MZK46_RS13475 ceuB 2494857..2495807 (-) 951 WP_318539301.1 ABC transporter permease Machinery gene
  MZK46_RS13480 - 2495960..2496694 (+) 735 WP_038564810.1 YqcI/YcgG family protein -
  MZK46_RS13485 tlp 2496750..2496983 (+) 234 WP_038564808.1 small acid-soluble spore protein Tlp -
  MZK46_RS13490 - 2497014..2497616 (-) 603 WP_318541013.1 spore coat protein -
  MZK46_RS13495 - 2497696..2497827 (-) 132 WP_084160843.1 YfhD family protein -
  MZK46_RS13500 - 2497877..2498098 (-) 222 WP_038564806.1 alpha/beta-type small acid-soluble spore protein -
  MZK46_RS13505 - 2498095..2498265 (-) 171 WP_164072109.1 hypothetical protein -
  MZK46_RS13510 - 2498362..2499210 (-) 849 WP_038564803.1 undecaprenyl-diphosphate phosphatase -
  MZK46_RS13515 - 2499223..2499843 (-) 621 WP_038564801.1 DedA family protein -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34812.99 Da        Isoelectric Point: 7.6208

>NTDB_id=680460 MZK46_RS13475 WP_318539301.1 2494857..2495807(-) (ceuB) [Terribacillus saccharophilus strain ZY-1]
MKLIYLFIITVLLAVCSLFVGVENVSFSALWNMDEEAWNIVMISRLPRMISIIMAGTSLSICGLIMQQITQNKFVSPTTA
GTMDWARLGILISLLFFTDASPIWKMCIAAAFALFGTLLFMGILQRLKQKDTIFIPLVGIMLGNVVSSIATFFALKFDLV
QNISSWLQGDFSLIMEGRYELLYISVPLLIIAFLFANMFTVAGMGEDFATNLGLPYKYVVNVGLIIVAIITAVVILTVGV
IPFLGLIVPNIVSIYRGDNLKNSIWHTAVLGAAFLLVCDIAGRLIIYPYEISVGLMVGVIGTGIFLYMLLRRNAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=680460 MZK46_RS13475 WP_318539301.1 2494857..2495807(-) (ceuB) [Terribacillus saccharophilus strain ZY-1]
ATGAAGTTGATTTACTTGTTTATTATTACCGTTCTATTAGCTGTTTGTTCCCTGTTTGTCGGAGTGGAAAACGTATCATT
CTCTGCATTGTGGAACATGGATGAGGAAGCCTGGAATATTGTTATGATCAGCCGCTTGCCGCGGATGATCAGCATCATCA
TGGCTGGTACAAGTCTTAGCATATGCGGACTGATCATGCAGCAGATTACGCAGAACAAATTCGTATCTCCGACAACTGCT
GGGACGATGGATTGGGCTAGATTAGGAATTCTTATTTCCTTGCTATTCTTCACCGATGCAAGCCCGATATGGAAAATGTG
TATCGCAGCTGCTTTTGCTTTATTCGGCACCTTGCTCTTTATGGGAATTCTCCAGAGACTGAAGCAGAAGGATACGATTT
TCATACCGCTGGTCGGAATTATGCTGGGAAATGTGGTCAGTTCTATTGCAACATTTTTTGCACTCAAGTTTGATCTGGTT
CAAAATATATCCTCTTGGCTTCAAGGAGATTTTTCTTTGATCATGGAAGGACGCTATGAGCTTCTTTACATAAGTGTACC
GCTTCTAATTATTGCTTTTTTGTTTGCAAATATGTTCACAGTTGCCGGAATGGGAGAAGATTTCGCTACAAATCTTGGTC
TTCCTTATAAATATGTAGTGAACGTAGGTTTGATTATTGTCGCAATTATTACAGCAGTGGTCATTCTGACAGTAGGTGTC
ATTCCTTTTCTCGGTTTGATTGTCCCAAATATCGTAAGTATATATCGCGGTGACAATTTAAAGAACAGCATTTGGCATAC
AGCTGTTCTTGGTGCAGCATTCCTGCTCGTATGTGATATAGCAGGGCGCTTGATCATCTATCCATATGAAATCTCGGTAG
GTCTCATGGTTGGCGTCATTGGCACAGGTATCTTCCTTTATATGCTGTTAAGGAGAAACGCCTATGCTTAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53

94.937

0.503