Detailed information NTG0680304

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: M0D58_RS10515
• Genome accession: NZ_CP096203
• Coordinates: 2413189..2414298 (+)
• Length: 369 a.a.
• NCBI ID: WP_248389042.1
• Uniprot ID: -
• Organism: Chryseobacterium nepalense strain AC3
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2408189..2419298

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M0D58_RS10495 (M0D58_10495)	sufC	2408895..2409638 (+)	744	WP_248389038.1	Fe-S cluster assembly ATPase SufC	-
M0D58_RS10500 (M0D58_10500)	sufD	2409732..2411039 (+)	1308	WP_248394973.1	Fe-S cluster assembly protein SufD	-
M0D58_RS10505 (M0D58_10505)	-	2411178..2412104 (-)	927	WP_248389039.1	DUF3078 domain-containing protein	-
M0D58_RS10510 (M0D58_10510)	-	2412351..2413121 (+)	771	WP_248389040.1	rhomboid family intramembrane serine protease	-
M0D58_RS10515 (M0D58_10515)	dprA	2413189..2414298 (+)	1110	WP_248389042.1	DNA-processing protein DprA	Machinery gene
M0D58_RS10520 (M0D58_10520)	gdhA	2414489..2415847 (+)	1359	WP_248389044.1	NADP-specific glutamate dehydrogenase	-
M0D58_RS10525 (M0D58_10525)	-	2416008..2416373 (+)	366	WP_248389046.1	DUF1801 domain-containing protein	-
M0D58_RS10530 (M0D58_10530)	-	2416403..2416669 (-)	267	WP_248389048.1	hypothetical protein	-
M0D58_RS10535 (M0D58_10535)	-	2416853..2417200 (-)	348	WP_248389050.1	hypothetical protein	-
M0D58_RS10540 (M0D58_10540)	-	2417326..2417814 (-)	489	WP_248389052.1	YkgJ family cysteine cluster protein	-
M0D58_RS10545 (M0D58_10545)	-	2417811..2418785 (-)	975	WP_248389054.1	ion channel	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41650.55 Da
• Isoelectric Point: 6.5010

>NTDB_id=680304 M0D58_RS10515 WP_248389042.1 2413189..2414298(+) (dprA) [Chryseobacterium nepalense strain AC3]
MYSEEHLYSIALRECNLIGDINFHKLVRTFGSAKKAWLNAKKEYKKLDGFGYRMVADIGNPEHLKFAENELAFCERNNII
INLRHFGDLPELLNECNDAPAILYQKGNFDDTNQRISMVGTRNMTSYGQQFLTDFFEETHSCNYISVSGLALGIDKEVHE
QSLQKEIPTAAVLAHGFHMIYPSKNRKLSEKILEEGGALFTEFNSSRKPDRENFIQRNRIVAGLSPSTIVVETAFGGGSV
STATFANQYNREVFALPGKITDKQSQGCNQLIYQNKAACISTIKDLIDDLGLKKPKVKMDELFSRSEISIQLTEYQQLIF
NLISEHPSISLDEIIEKTDLASHKILPVILDLELLGKVKSLSGRQFITI

Nucleotide

• Length: 1110 bp

>NTDB_id=680304 M0D58_RS10515 WP_248389042.1 2413189..2414298(+) (dprA) [Chryseobacterium nepalense strain AC3]
ATGTATTCTGAAGAACATCTCTATTCTATTGCCCTCCGCGAATGTAATTTAATTGGTGATATTAATTTCCATAAACTTGT
GCGCACTTTCGGAAGTGCAAAAAAAGCATGGCTGAACGCCAAGAAAGAGTACAAAAAACTAGACGGCTTTGGCTACCGTA
TGGTTGCTGACATCGGAAATCCCGAACACCTGAAGTTTGCAGAGAATGAACTCGCATTTTGTGAAAGGAACAATATTATT
ATTAATCTCAGGCATTTTGGTGACCTTCCGGAATTGCTCAATGAGTGCAACGATGCTCCGGCCATTCTTTATCAAAAAGG
AAACTTTGATGACACAAACCAGCGGATCAGCATGGTCGGAACCCGAAATATGACGTCATACGGACAACAATTTCTTACCG
ATTTTTTTGAAGAAACACATTCCTGCAATTATATTTCCGTGAGCGGACTTGCTTTGGGTATTGACAAAGAAGTTCATGAG
CAGTCTCTTCAAAAAGAAATTCCTACCGCTGCAGTTTTAGCACATGGATTTCATATGATTTATCCTTCAAAAAACAGAAA
ACTGTCCGAAAAAATTTTGGAAGAAGGTGGTGCATTATTCACAGAATTCAACTCTTCCCGGAAACCGGACCGCGAAAATT
TTATCCAGCGGAATAGGATTGTTGCCGGTTTATCCCCTTCAACAATCGTTGTTGAGACTGCTTTTGGTGGCGGATCAGTA
AGTACTGCGACATTCGCCAACCAATACAACCGCGAAGTCTTTGCCTTACCAGGAAAAATTACAGATAAACAAAGCCAGGG
TTGCAATCAGCTGATTTATCAGAATAAGGCAGCATGCATTTCTACCATTAAAGATCTTATTGATGATTTAGGTCTTAAAA
AGCCTAAAGTAAAAATGGATGAATTATTTTCACGCAGTGAAATCAGTATTCAATTGACTGAATACCAACAATTAATATTT
AATCTTATATCAGAACATCCATCGATCTCTTTAGATGAAATTATTGAGAAAACAGATCTTGCATCTCATAAAATTTTACC
CGTAATTCTGGATTTGGAGCTTTTGGGGAAAGTAAAATCACTTTCGGGGAGACAATTTATTACAATATGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (310-363)

• DNA recombination-mediator protein A (DNA_processg_A) (75-280)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	54.496	99.458	0.542