Detailed information NTG0680268

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MTO69_RS12600
• Genome accession: NZ_CP096199
• Coordinates: 2759238..2760245 (-)
• Length: 335 a.a.
• NCBI ID: WP_248329677.1
• Uniprot ID: -
• Organism: Vibrio sinaloensis strain YA2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2754238..2765245

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTO69_RS12575 (MTO69_12575)	frdD	2754448..2754825 (+)	378	WP_248329669.1	fumarate reductase subunit FrdD	-
MTO69_RS12580 (MTO69_12580)	-	2754880..2756283 (-)	1404	WP_248329671.1	SPFH domain-containing protein	-
MTO69_RS12585 (MTO69_12585)	hslU	2756518..2757852 (-)	1335	WP_248329673.1	HslU--HslV peptidase ATPase subunit	-
MTO69_RS12590 (MTO69_12590)	hslV	2757893..2758435 (-)	543	WP_176286719.1	ATP-dependent protease subunit HslV	-
MTO69_RS12595 (MTO69_12595)	-	2758571..2759119 (-)	549	WP_248329675.1	SPOR domain-containing protein	-
MTO69_RS12600 (MTO69_12600)	cytR	2759238..2760245 (-)	1008	WP_248329677.1	DNA-binding transcriptional regulator CytR	Regulator
MTO69_RS12605 (MTO69_12605)	priA	2760596..2762797 (-)	2202	WP_248329679.1	primosomal protein N'	-
MTO69_RS12610 (MTO69_12610)	rpmE	2763078..2763296 (+)	219	WP_176286715.1	50S ribosomal protein L31	-
MTO69_RS12615 (MTO69_12615)	-	2763557..2764834 (+)	1278	WP_248329681.1	malic enzyme-like NAD(P)-binding protein	-
MTO69_RS12620 (MTO69_12620)	metJ	2764917..2765234 (-)	318	WP_176286713.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36925.42 Da
• Isoelectric Point: 6.4956

>NTDB_id=680268 MTO69_RS12600 WP_248329677.1 2759238..2760245(-) (cytR) [Vibrio sinaloensis strain YA2]
MATMKDVAQLAGVSTATVSRALMNPEKVSSATRKRVEDAVLEAGYSPNSLARNLRRNESKTIIAIIPDICDPYYTEIIRG
IEDAAMEHGYIVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEYAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRIAEISGPQSAALCHFRQQGYQQALRRAGVTMNPNYRAFGDFSFESGARAVRQLLSLPEPPTA
VFCHNDAMAIGAIQEAKKLGIRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TTLVVRDSAAPPRVI

Nucleotide

• Length: 1008 bp

>NTDB_id=680268 MTO69_RS12600 WP_248329677.1 2759238..2760245(-) (cytR) [Vibrio sinaloensis strain YA2]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTTTCGACAGCGACGGTTTCGCGTGCGCTAATGAATCCGGAAAA
AGTATCATCAGCGACGAGAAAACGAGTAGAAGACGCTGTTTTAGAAGCTGGATATTCACCAAATTCGTTGGCAAGGAATC
TGCGCCGCAACGAATCCAAAACGATCATCGCGATCATTCCTGATATCTGTGACCCTTATTACACTGAAATCATTCGCGGC
ATCGAAGACGCGGCGATGGAGCATGGCTACATTGTACTACTAGGCGATAGTGGTCAGCAGAAAAAGCGCGAGAGCTCGTT
CGTCAACCTTGTATTCACCAAGCAAGCCGATGGCATGTTACTGCTCGGTACAGATTTGCCGTTTGATGTCAGCAAACCCG
AGCAGAAAAACTTACCGCCTATGGTGATGGCGTGTGAATATGCGCCTGAGCTGGAGCTTCCTACGGTGCATATCGACAAC
TTGACCTCTGCTTTTGAAGCGGTCAACTACCTCACTCAAATGGGGCATAAGCGCATCGCCGAGATATCTGGACCACAGTC
CGCGGCTCTGTGTCATTTCCGTCAGCAGGGGTACCAGCAAGCGCTGCGCCGAGCCGGAGTGACGATGAACCCTAACTATC
GTGCATTTGGCGATTTCAGCTTTGAATCGGGTGCGCGAGCGGTACGTCAATTACTGTCGTTGCCTGAGCCGCCGACCGCT
GTGTTCTGCCACAACGACGCGATGGCGATCGGTGCGATTCAAGAAGCGAAAAAGCTTGGCATCCGAGTGCCTCAAGACTT
GTCTGTTGTTGGCTTCGACGATATTCAGTTCGCTCAGTACTGCGATCCACCGTTAACGACGATTTCTCAGCCTCGTTACG
AGATTGGCCGTCAAGCTATGCTGATGATGCTAGAACTGCTGCGTGGTCATGACGTACGAGCTGGCTCGCGTTTGCTTGAA
ACCACACTCGTGGTTCGCGACAGTGCCGCGCCACCACGCGTGATATAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	90.964	99.104	0.901
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.403	0.872