Detailed information NTG0680260

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: MTO69_RS11225
• Genome accession: NZ_CP096199
• Coordinates: 2487778..2491167 (+)
• Length: 1129 a.a.
• NCBI ID: WP_282567524.1
• Uniprot ID: -
• Organism: Vibrio sinaloensis strain YA2
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2482778..2496167

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTO69_RS11205 (MTO69_11205)	erpA	2483225..2483566 (-)	342	WP_348983335.1	iron-sulfur cluster insertion protein ErpA	-
MTO69_RS11210 (MTO69_11210)	hemL	2483822..2485114 (+)	1293	WP_248329275.1	glutamate-1-semialdehyde 2,1-aminomutase	-
MTO69_RS11215 (MTO69_11215)	-	2485392..2486477 (+)	1086	WP_248329277.1	AI-2E family transporter	-
MTO69_RS11220 (MTO69_11220)	rsmC	2486547..2487569 (+)	1023	WP_248329279.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
MTO69_RS11225 (MTO69_11225)	chiS	2487778..2491167 (+)	3390	WP_282567524.1	response regulator	Regulator
MTO69_RS11230 (MTO69_11230)	-	2491965..2493647 (+)	1683	WP_248329281.1	ABC transporter substrate-binding protein	-
MTO69_RS11235 (MTO69_11235)	-	2493822..2494808 (+)	987	WP_248329283.1	ABC transporter permease	-
MTO69_RS11240 (MTO69_11240)	-	2494811..2495836 (+)	1026	WP_248329284.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127329.82 Da
• Isoelectric Point: 5.8008

>NTDB_id=680260 MTO69_RS11225 WP_282567524.1 2487778..2491167(+) (chiS) [Vibrio sinaloensis strain YA2]
MFKLYRKQKFKRLQSTLMLAFLVLSITPLTVIAIFFLQSHTADLQEQSTSHLVSVRDSKQQQVIDYLYAKESEVMGFVRS
ELAYASGGRFYGLVNAFQNLGLDIEQARENAQQRYIQGSGDQIKTSILPQSSVFNGTERYRLLHKRYHWAYLELLKRSDF
DDVLLVDREGNVTYSIYKHDYFGTNLLSGRYKDDNLGQTFSKLRNLVNAKRKTNEDFTPVIISDFSPQDGKSVAWLGAPI
IQQGYLHSYALFRLPNNGITKLIADDTDNPRRTLLVGSDHLSRSLAYQQTDIDKSKTVIDLALSGLTNVGTYSNADNESI
IAAYSPVSVKGIEWALVVEVPESVAFARVHQLETLFIFAMLSAILLVVMASHYLSNFITSPLLKLTWAAEKVSAGDLDAD
MINTQRKDEIGRLAVSFERMQRSIREKILLIKQQNKELESNIQLIQKQNDELQLANKLKDEFLATTSHELRTPLHGMVGI
AEALVSGANGPITAEQKYQLDIIISSGQRLATLVDDLLDYHKMRYGNLDIETCAVDLAGSTRLVLELSSHLLGNKPIRII
NQVPNEPVWVCADPQRLEQVLYNLVGNAIKYTSEGKIVISAGVVDDNIRVQVVDTGQGIPADQLEHIFEPLIQAGNDSSR
YRQGAGLGLSISRQLIELMQGSLYVSSQPMVGTTFSFTLPLASDEQIQAANHYHYDAPHFKAPETNEIEFEEPTSLPENS
DGPLLLVVDDEPVNLRVLDSFLRIEGYRVRTAKDGHEALQAIESDKPELVLLDIMMPGMSGYQVCETVRQSYDHAQLPII
MLTALNQTDDRLRGFSVGANDYLSKPFNKQELAARIRAHLTASKAELRRIENQQLQQELKQRAMVEASLLETQGRLLEQL
ETAPEAIICVREDHKIRFANEAASKLFRRSAEQLKRSSADEIIAPKYLNVEQEHYCGKIDIYVDDVRQHLSADILRLPPE
SGLRFMYIFNVGGGVNVTRINNLETAIEALSSFAFEGDRAKLQELKELGGEFTRLADKVAGDNKSKQDIMREVLVDAMTS
ALTYWESVTGQTKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRLETLPKTPRWRTVLSSLDYILEHCNEQSPERTHIEALR
DKLQHLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=680260 MTO69_RS11225 WP_282567524.1 2487778..2491167(+) (chiS) [Vibrio sinaloensis strain YA2]
ATGTTTAAGTTGTATCGAAAACAGAAATTTAAACGCCTGCAAAGTACGCTGATGCTGGCGTTTTTAGTATTGAGCATCAC
GCCACTGACGGTGATTGCGATTTTTTTCTTACAATCCCACACTGCAGATCTTCAAGAACAAAGTACTTCGCACCTGGTTT
CTGTTCGTGACAGCAAACAGCAACAGGTGATCGACTATCTATACGCCAAGGAGTCGGAGGTGATGGGGTTTGTGCGCTCC
GAACTTGCCTACGCCAGTGGTGGTCGCTTCTACGGTTTGGTTAACGCCTTCCAAAACCTAGGTTTAGATATCGAGCAAGC
CCGAGAAAATGCCCAGCAACGTTACATCCAAGGCTCAGGCGATCAAATTAAGACTTCCATCTTGCCGCAATCGAGTGTGT
TCAACGGCACTGAGCGCTATCGTTTATTACACAAACGTTACCACTGGGCCTATTTAGAGCTACTTAAACGGTCCGATTTT
GATGATGTTCTACTGGTCGATCGCGAAGGTAATGTCACTTACTCGATCTACAAACACGATTATTTCGGCACCAACTTACT
ATCAGGACGCTACAAAGACGACAACTTGGGGCAAACCTTCAGCAAACTGCGCAATCTCGTTAACGCAAAGCGCAAAACCA
ACGAAGACTTTACTCCTGTGATTATCTCTGACTTTTCTCCTCAGGACGGTAAATCTGTCGCTTGGCTTGGTGCGCCGATC
ATTCAACAGGGCTACTTACACAGCTACGCGCTATTTCGCCTACCTAATAACGGCATCACTAAGTTGATTGCCGACGATAC
AGACAACCCAAGACGTACCTTACTGGTCGGCAGTGATCACCTGTCTCGCTCTTTGGCTTACCAACAAACGGACATTGACA
AGAGTAAAACCGTCATCGACTTAGCACTATCTGGCTTGACCAATGTCGGCACCTACTCAAATGCGGATAACGAATCGATT
ATCGCCGCCTACAGCCCGGTCTCGGTGAAAGGTATCGAGTGGGCACTGGTGGTGGAAGTGCCAGAGAGCGTTGCGTTTGC
ACGAGTTCATCAGCTGGAAACCTTGTTCATCTTCGCTATGCTCAGCGCCATTTTGTTGGTCGTCATGGCGTCACACTACT
TATCCAACTTCATCACCTCGCCACTGCTTAAGCTTACTTGGGCGGCGGAGAAGGTCTCAGCGGGCGATCTCGACGCGGAT
ATGATCAACACCCAGCGCAAGGATGAAATCGGGCGTCTTGCCGTCAGTTTTGAGCGAATGCAACGCTCAATTCGCGAGAA
GATCCTGCTTATCAAGCAACAGAATAAAGAGCTTGAGAGCAATATTCAGTTGATTCAAAAACAAAACGATGAGCTTCAGC
TAGCGAATAAGCTTAAAGATGAGTTCCTCGCCACCACCTCACATGAGCTGCGCACCCCACTTCATGGCATGGTTGGTATT
GCTGAAGCGCTGGTGTCTGGCGCCAATGGGCCGATCACCGCCGAGCAGAAATACCAACTCGATATCATTATTAGCAGTGG
TCAGCGCCTAGCGACCTTGGTTGACGATCTGCTCGATTATCACAAAATGCGTTATGGCAACTTAGATATCGAGACCTGCG
CGGTCGACTTGGCGGGTTCAACCCGTTTGGTCCTTGAACTGTCATCGCACTTATTGGGCAACAAACCCATTCGCATCATC
AACCAAGTACCCAACGAACCGGTCTGGGTTTGTGCCGATCCACAAAGACTTGAACAGGTGCTGTACAACCTAGTGGGTAA
CGCGATTAAGTACACCAGTGAAGGCAAGATCGTCATTTCTGCCGGTGTGGTCGATGATAACATTCGCGTGCAGGTGGTTG
ATACCGGCCAAGGGATCCCTGCCGATCAACTGGAGCATATTTTTGAACCTTTGATCCAAGCTGGCAACGACTCCAGTCGT
TATCGACAAGGCGCGGGGCTCGGGCTCTCAATCAGCCGCCAACTGATCGAATTGATGCAAGGCTCTCTATACGTCAGCAG
TCAACCTATGGTGGGGACCACTTTCAGCTTTACCTTGCCTTTGGCGAGTGACGAGCAAATCCAAGCTGCGAACCACTACC
ATTACGATGCGCCGCATTTCAAGGCGCCAGAAACCAACGAGATTGAGTTTGAAGAGCCCACTAGCTTGCCTGAAAATAGT
GATGGCCCATTGTTACTGGTGGTCGATGATGAGCCTGTTAACTTGCGTGTTCTCGACAGTTTCTTACGTATCGAGGGTTA
TCGCGTACGCACGGCAAAAGATGGGCATGAAGCGTTACAAGCGATTGAAAGCGACAAACCTGAACTGGTCTTGCTTGATA
TTATGATGCCTGGCATGAGTGGCTACCAGGTGTGTGAGACGGTACGTCAAAGCTATGACCATGCTCAACTGCCGATCATC
ATGCTCACCGCGCTAAATCAAACCGATGACCGTCTGCGTGGATTTAGTGTTGGGGCCAACGACTACCTATCGAAACCGTT
CAACAAGCAAGAACTCGCTGCGCGTATTCGCGCTCACTTAACGGCCAGCAAAGCGGAACTAAGGCGTATTGAAAACCAAC
AGCTGCAACAAGAGCTCAAGCAGCGAGCTATGGTCGAAGCAAGTTTGCTGGAAACTCAAGGACGATTGCTCGAGCAGCTA
GAGACCGCGCCTGAAGCCATTATTTGTGTACGTGAAGACCATAAGATTCGTTTTGCCAATGAAGCGGCATCGAAACTATT
TAGACGCTCTGCTGAGCAACTGAAACGCTCCAGCGCCGACGAAATCATCGCGCCAAAATATTTGAATGTCGAGCAAGAAC
ACTACTGTGGCAAGATTGATATTTATGTCGACGATGTAAGACAACATCTGTCAGCCGATATATTAAGACTCCCGCCAGAG
TCTGGATTGCGATTTATGTATATCTTCAACGTTGGCGGCGGTGTCAATGTGACTCGCATCAATAACCTTGAAACCGCCAT
AGAGGCACTCTCTAGCTTTGCGTTTGAGGGGGACCGAGCCAAACTGCAAGAACTCAAAGAGCTGGGTGGTGAGTTTACTC
GCCTTGCAGACAAAGTGGCCGGGGACAACAAGTCTAAGCAAGATATCATGCGCGAAGTCTTGGTCGATGCCATGACCAGC
GCTTTGACCTACTGGGAGTCCGTCACCGGTCAAACCAAGTTTGCCTTTGCAGAGCAAAGTGGATTGTGGCGCGTTTACCT
TGACCGTAGTACCTTGCAAACTCGCACGCTAGACAAGTATTTGCGTCTGGAAACTCTGCCCAAAACACCCCGCTGGCGCA
CGGTATTAAGCTCACTGGACTACATCTTAGAGCACTGCAACGAACAAAGCCCAGAGCGCACGCACATCGAGGCGCTGCGA
GATAAGCTTCAGCATTTACTCACCAGTTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-682)

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• Response regulator receiver domain (Response_reg) (726-837)

• HAMP domain (HAMP) (374-426)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	79.027	100	0.791