Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   MTO69_RS04065 Genome accession   NZ_CP096199
Coordinates   842068..843462 (+) Length   464 a.a.
NCBI ID   WP_248331344.1    Uniprot ID   -
Organism   Vibrio sinaloensis strain YA2     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 837068..848462
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTO69_RS04045 (MTO69_04045) rsxB 837579..838163 (-) 585 WP_248331342.1 electron transport complex subunit RsxB -
  MTO69_RS04050 (MTO69_04050) rsxA 838163..838744 (-) 582 WP_176288301.1 electron transport complex subunit RsxA -
  MTO69_RS04060 (MTO69_04060) uvrB 839769..841799 (+) 2031 WP_248334333.1 excinuclease ABC subunit UvrB -
  MTO69_RS04065 (MTO69_04065) luxO 842068..843462 (+) 1395 WP_248331344.1 quorum-sensing sigma-54 dependent transcriptional regulator LuxO Regulator
  MTO69_RS04070 (MTO69_04070) luxU 843459..843803 (+) 345 WP_248334336.1 quorum-sensing phosphorelay protein LuxU -
  MTO69_RS04075 (MTO69_04075) - 843789..844676 (-) 888 WP_248331346.1 YvcK family protein -
  MTO69_RS04080 (MTO69_04080) moaA 844968..845957 (+) 990 WP_248331348.1 GTP 3',8-cyclase MoaA -
  MTO69_RS04085 (MTO69_04085) moaB 846033..846545 (+) 513 WP_248334348.1 molybdenum cofactor biosynthesis protein B -
  MTO69_RS04090 (MTO69_04090) moaC 846558..847037 (+) 480 WP_248331350.1 cyclic pyranopterin monophosphate synthase MoaC -
  MTO69_RS04095 (MTO69_04095) moaD 847034..847279 (+) 246 WP_248331352.1 molybdopterin synthase sulfur carrier subunit -
  MTO69_RS04100 (MTO69_04100) moaE 847281..847736 (+) 456 WP_248331354.1 molybdopterin synthase catalytic subunit MoaE -

Sequence

Protein


Download         Length: 464 a.a.        Molecular weight: 51470.83 Da        Isoelectric Point: 5.3931

>NTDB_id=680248 MTO69_RS04065 WP_248331344.1 842068..843462(+) (luxO) [Vibrio sinaloensis strain YA2]
MQQVLDAQKAKYLLMVEDTASVAALYRSYLTPLQIDINIVGTGRDAIESLNFRTPDLILLDLRLPDMTGMDVLHAVKEKN
PDVPVIFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNALRKANKLKNDADNSGSQGYQGFIGSSQTMQAVYRT
IDSAASSKASIFITGESGTGKEVCAEAIHATSKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVEEGRFREDLYYRLYVIPLHLPPLRE
RGDDIIEIAYSLLGYMSKEEGKDFVRLAPEVVERFARYEWPGNVRQLQNVLRNVVVLNNGREITLDMLPPPLNQPAKNEI
RVALTPSDTVSVQDIFPLWLTEKNAIEQAIKACDGNIPKAAGYLDVSPSTIYRKLQSWNAKEAQ

Nucleotide


Download         Length: 1395 bp        

>NTDB_id=680248 MTO69_RS04065 WP_248331344.1 842068..843462(+) (luxO) [Vibrio sinaloensis strain YA2]
ATGCAACAAGTACTCGATGCTCAAAAAGCAAAATATTTGTTGATGGTAGAAGATACAGCGTCAGTGGCGGCCTTGTACCG
TTCGTATCTCACTCCGCTGCAAATAGACATCAATATTGTCGGTACGGGACGTGACGCAATTGAGAGTCTCAACTTTCGCA
CGCCTGATCTGATCCTCCTCGATTTACGTCTACCCGATATGACGGGGATGGATGTGCTCCACGCGGTAAAAGAGAAAAAT
CCCGATGTGCCGGTGATCTTTATGACTGCGCATGGCTCTATCGATACTGCGGTTGAAGCGATGCGTCATGGGGCGCAAGA
TTTTCTAATCAAACCTTGTGAAGCTGACCGATTGCGCGTCACCGTCAATAACGCGCTGCGTAAAGCAAATAAACTCAAGA
ATGACGCTGATAACTCCGGAAGTCAGGGCTATCAAGGGTTTATCGGCAGTAGTCAGACGATGCAAGCAGTGTATCGTACC
ATCGACTCTGCCGCGAGCAGCAAAGCCAGCATCTTCATCACCGGTGAGAGTGGTACCGGTAAAGAGGTGTGCGCAGAGGC
GATTCACGCCACCAGTAAACGCGGTGACAAGCCCTTTATCGCGATCAACTGTGCGGCTATTCCCAAAGACTTAATCGAGA
GTGAACTGTTTGGTCATGTTAAAGGGGCGTTTACTGGCGCTGCTACAGACAGGCAGGGCGCGGCGGAGCTCGCCGATGGC
GGTACGCTGTTCTTAGATGAGCTGTGTGAGATGGATTTAGATCTGCAGACGAAGCTGCTGCGCTTTATCCAAACCGGTAC
CTTCCAAAAAGTGGGTTCATCGAAGATGAAAAGTGTCGATGTCCGTTTTGTCTGCGCCACCAACCGAGACCCTTGGAAAG
AGGTCGAAGAAGGGCGTTTTCGTGAAGACCTTTACTATCGGCTGTACGTGATCCCTCTGCATTTACCTCCTTTGAGGGAG
CGCGGGGATGACATTATTGAGATAGCCTATTCGTTGCTCGGGTATATGTCGAAAGAAGAAGGCAAAGACTTTGTTCGCTT
AGCGCCTGAAGTGGTCGAGCGTTTTGCGCGTTATGAGTGGCCGGGTAACGTTCGCCAGTTACAAAATGTGCTGCGCAATG
TGGTAGTGCTCAATAATGGTCGTGAAATTACCCTGGATATGTTGCCACCCCCTTTGAATCAGCCTGCCAAAAATGAAATT
CGAGTGGCACTCACGCCGAGTGATACTGTCTCTGTTCAGGATATATTTCCATTATGGCTGACAGAAAAAAATGCGATAGA
ACAAGCGATCAAAGCATGTGATGGCAATATTCCTAAAGCGGCGGGATATTTGGATGTCAGCCCATCGACCATCTATCGTA
AACTACAATCTTGGAACGCGAAGGAAGCGCAATAG

Domains

Predicted by InterproScan.

Bacterial regulatory protein, Fis family (HTH_8)

(418-456)

Response regulator receiver domain (Response_reg)

(14-122)

Sigma-54 interaction domain (Sigma54_activat)

(148-313)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

88.789

96.121

0.853