Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   M0769_RS07890 Genome accession   NZ_CP096187
Coordinates   1655749..1656375 (+) Length   208 a.a.
NCBI ID   WP_048962070.1    Uniprot ID   A0AAU9BLQ2
Organism   Enterobacter roggenkampii strain C3-17 isolate C3-17     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1650749..1661375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0769_RS07870 (M0769_07870) - 1651147..1652907 (-) 1761 WP_123922634.1 AAA family ATPase -
  M0769_RS07875 (M0769_07875) matP 1653094..1653546 (+) 453 WP_008499929.1 macrodomain Ter protein MatP -
  M0769_RS07880 (M0769_07880) ompA 1653612..1654667 (-) 1056 WP_008499928.1 porin OmpA -
  M0769_RS07885 (M0769_07885) sulA 1655022..1655531 (-) 510 WP_123923878.1 SOS-induced cell division inhibitor SulA -
  M0769_RS07890 (M0769_07890) sxy/tfoX 1655749..1656375 (+) 627 WP_048962070.1 TfoX/Sxy family DNA transformation protein Regulator
  M0769_RS07895 (M0769_07895) yccS 1656332..1658494 (-) 2163 WP_181530536.1 YccS family putative transporter -
  M0769_RS07900 (M0769_07900) - 1658514..1658960 (-) 447 WP_008499924.1 YccF domain-containing protein -
  M0769_RS07905 (M0769_07905) helD 1659084..1661138 (+) 2055 WP_123922633.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23901.49 Da        Isoelectric Point: 9.6030

>NTDB_id=680221 M0769_RS07890 WP_048962070.1 1655749..1656375(+) (sxy/tfoX) [Enterobacter roggenkampii strain C3-17 isolate C3-17]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRTRLKDLPNLTFQLEVLLYEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQESRSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=680221 M0769_RS07890 WP_048962070.1 1655749..1656375(+) (sxy/tfoX) [Enterobacter roggenkampii strain C3-17 isolate C3-17]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGCGGTTACACCCTGGCGGTCGATGATGCGGTCTTTGCCATGGTGTCCGATGGCGAACTTTACCTTCGCGCGTGTG
AAGAGAGTGCAAAATACTGTGTAAAAAATGCTTCCTCCTTCTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCACTCAGTGCGGCAAG
GAAAGAGCGCTACCAGCGTCATCAACGAACCCGTCTTAAGGATCTGCCGAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
ATGAAGCTGGTATCACCAATGAAGAAACGCTGCGGGCGCTGGGCGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAGAAT
AAAGCACTCAGTATAAAAGTGCTCTTTGCGCTGGAAGGGGCTATCGAAGGGCTGCATGAGGCGGCGCTCCCGGCAGGTAT
CCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCGCAGGAGAGTCGTTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567