Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   MZN44_RS13585 Genome accession   NZ_CP096152
Coordinates   2723867..2725111 (-) Length   414 a.a.
NCBI ID   WP_003730598.1    Uniprot ID   A0A5D5H851
Organism   Listeria monocytogenes strain FSL J2-0071     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 2718867..2730111
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZN44_RS13560 (MZN44_13560) - 2718887..2719249 (-) 363 WP_003721907.1 YlbF family regulator -
  MZN44_RS13565 (MZN44_13565) - 2719266..2720069 (-) 804 WP_003721906.1 TIGR00282 family metallophosphoesterase -
  MZN44_RS13570 (MZN44_13570) - 2720074..2720571 (-) 498 WP_003736573.1 GNAT family N-acetyltransferase -
  MZN44_RS13575 (MZN44_13575) rny 2720685..2722247 (-) 1563 WP_003738907.1 ribonuclease Y -
  MZN44_RS13580 (MZN44_13580) recA 2722548..2723594 (-) 1047 WP_003725961.1 recombinase RecA Machinery gene
  MZN44_RS13585 (MZN44_13585) cinA 2723867..2725111 (-) 1245 WP_003730598.1 competence/damage-inducible protein A Machinery gene
  MZN44_RS13590 (MZN44_13590) pgsA 2725178..2725756 (-) 579 WP_003723921.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MZN44_RS13595 (MZN44_13595) - 2725847..2726776 (-) 930 WP_003730599.1 RodZ family helix-turn-helix domain-containing protein -
  MZN44_RS13600 (MZN44_13600) - 2726827..2727558 (-) 732 WP_003730600.1 SDR family oxidoreductase -
  MZN44_RS13605 (MZN44_13605) - 2727651..2728937 (-) 1287 WP_003730601.1 pitrilysin family protein -

Sequence

Protein


Download         Length: 414 a.a.        Molecular weight: 45649.81 Da        Isoelectric Point: 4.6526

>NTDB_id=679854 MZN44_RS13585 WP_003730598.1 2723867..2725111(-) (cinA) [Listeria monocytogenes strain FSL J2-0071]
MASAEIIAVGTELLLGQIVNSNAAFISQELAADGIYVYHHTVVGDNPARLKEVIEIAENRSDILIFTGGLGPTEDDITKQ
ILAAHLQKQLVEDEYHMNKINEYFTSRNRTMTENNKLQAVIIEDSIVLNNDFGFAAGMYLRENNHTYVLLPGPPSEMKPM
FTSYANPLLLSESGDQNILESKIMRFFGIGESQLAADLNDLIVTQVNPTIATYAGDNEVVVRITATAKTKEEASRLVKDT
EEEILRRDGTFLYGYGEVSLSELVTAMLLEKELTISAAESFTAGLFQAEIARFPGISKIFKGGMVTYSEETKQSILQVSP
QVIKEKGVVSAECAKEMAENVSRLCKTDIGISFTGVAGPDSLEGHPAGTIWIGLSVKGYETEAFQFVYGRDRNHNRRRAV
KQGFQLIKQFLDAN

Nucleotide


Download         Length: 1245 bp        

>NTDB_id=679854 MZN44_RS13585 WP_003730598.1 2723867..2725111(-) (cinA) [Listeria monocytogenes strain FSL J2-0071]
TTGGCAAGTGCGGAAATCATTGCTGTAGGAACAGAACTATTACTTGGACAAATTGTTAATTCTAATGCTGCGTTTATTTC
ACAAGAATTAGCTGCAGACGGAATATATGTATATCATCACACGGTAGTTGGAGATAATCCGGCGCGTTTAAAAGAAGTAA
TTGAAATCGCTGAAAACCGAAGTGACATTTTAATCTTTACCGGCGGACTTGGACCGACTGAGGATGATATTACAAAACAA
ATCTTAGCTGCTCATCTACAAAAGCAATTAGTGGAAGATGAATACCATATGAATAAAATTAATGAGTATTTTACTTCTAG
GAATAGGACTATGACCGAAAATAATAAATTACAAGCGGTTATTATTGAAGATTCCATCGTATTAAATAATGATTTTGGCT
TTGCGGCTGGAATGTACTTAAGAGAAAACAATCATACTTACGTTTTACTACCAGGGCCACCATCTGAAATGAAACCAATG
TTTACAAGCTATGCTAACCCATTACTTTTAAGCGAAAGTGGTGATCAAAACATTTTAGAATCCAAAATTATGCGCTTTTT
CGGTATTGGAGAATCACAATTAGCTGCGGATTTAAATGATTTGATTGTCACACAAGTCAACCCGACGATTGCGACCTATG
CTGGTGATAATGAAGTCGTGGTTCGTATCACAGCGACAGCTAAAACAAAAGAAGAAGCAAGCAGGCTTGTAAAGGATACC
GAGGAAGAAATATTGCGCCGAGATGGTACCTTTTTATATGGATATGGAGAGGTGTCATTGTCTGAATTAGTTACGGCGAT
GTTACTTGAAAAAGAACTTACCATCTCTGCTGCAGAAAGTTTCACTGCTGGTTTGTTCCAAGCAGAAATTGCCCGCTTTC
CTGGCATTTCGAAAATTTTCAAGGGTGGTATGGTGACATACAGTGAAGAAACAAAACAATCTATATTACAAGTATCTCCC
CAAGTAATAAAAGAAAAAGGCGTTGTTAGTGCGGAATGTGCAAAGGAAATGGCTGAAAATGTAAGCCGCCTTTGTAAGAC
GGATATTGGAATCAGTTTTACAGGTGTTGCAGGCCCAGATAGTTTAGAAGGTCATCCTGCTGGTACTATTTGGATTGGGT
TAAGCGTTAAAGGTTATGAAACAGAGGCTTTTCAGTTTGTTTATGGAAGAGATCGAAACCATAATCGCCGCCGTGCAGTA
AAACAAGGATTTCAGTTAATTAAACAATTTTTAGACGCGAATTAG

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(259-410)

Damage-inducible protein CinA KH domain (CinA_KH)

(181-254)

Probable molybdopterin binding domain (MoCF_biosynth)

(6-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5D5H851

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

51.345

98.792

0.507
  cinA Streptococcus pneumoniae TIGR4

49.048

100

0.498
  cinA Streptococcus mitis SK321

48.926

100

0.495
  cinA Streptococcus mitis NCTC 12261

48.687

100

0.493
  cinA Streptococcus pneumoniae Rx1

48.333

100

0.49
  cinA Streptococcus pneumoniae R6

48.333

100

0.49
  cinA Streptococcus pneumoniae D39

48.095

100

0.488
  cinA Streptococcus mutans UA159

48.544

99.517

0.483
  cinA Streptococcus suis isolate S10

38.835

99.517

0.386