Detailed information NTG0679767

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: OH128_RS03415
• Genome accession: NZ_CP109813
• Coordinates: 679476..680420 (-)
• Length: 314 a.a.
• NCBI ID: WP_052779190.1
• Uniprot ID: -
• Organism: Campylobacter coli strain CC20JX12
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 674476..685420

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OH128_RS03390 (OH128_03390)	-	674579..675142 (+)	564	WP_002787747.1	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	-
OH128_RS03395 (OH128_03395)	rfaD	675139..676092 (+)	954	WP_264378411.1	ADP-glyceromanno-heptose 6-epimerase	-
OH128_RS03400 (OH128_03400)	rfaE1	676085..677470 (+)	1386	WP_264378412.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
OH128_RS03405 (OH128_03405)	gmhA	677467..678027 (+)	561	WP_052783332.1	D-sedoheptulose 7-phosphate isomerase	-
OH128_RS03410 (OH128_03410)	-	678039..679493 (+)	1455	WP_002791237.1	hypothetical protein	-
OH128_RS03415 (OH128_03415)	waaF	679476..680420 (-)	945	WP_052779190.1	lipopolysaccharide heptosyltransferase II	Regulator
OH128_RS03420 (OH128_03420)	-	680479..681294 (+)	816	WP_052779189.1	glycosyltransferase family 2 protein	-
OH128_RS03425 (OH128_03425)	-	681313..681729 (-)	417	WP_002796922.1	adenylyltransferase/cytidyltransferase family protein	-
OH128_RS03430 (OH128_03430)	-	681732..682781 (-)	1050	WP_002804034.1	asparagine synthase C-terminal domain-containing protein	-
OH128_RS03435 (OH128_03435)	-	682778..684082 (-)	1305	WP_052783333.1	hypothetical protein	-
OH128_RS03440 (OH128_03440)	-	684210..685409 (+)	1200	WP_002797725.1	glycosyltransferase family 8 protein	-

Sequence

Protein

• Length: 314 a.a.
• Molecular weight: 36184.65 Da
• Isoelectric Point: 10.1355

>NTDB_id=679767 OH128_RS03415 WP_052779190.1 679476..680420(-) (waaF) [Campylobacter coli strain CC20JX12]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELDKIDLSFT
FRSAFSSKIILHILKTRQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHSKDLKLPFKLKFQNPIVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKICPLKHHKCMKDLKPEMVLEKLKFDT

Nucleotide

• Length: 945 bp

>NTDB_id=679767 OH128_RS03415 WP_052779190.1 679476..680420(-) (waaF) [Campylobacter coli strain CC20JX12]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGATAAAATCGATCTTAGCTTCACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAGACAAAGATATTTTTTTGACAAAAATAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTAGATATCAAAGCTCATTCTAAGGATTTAA
AACTCCCTTTTAAATTAAAATTTCAAAATCCTATTGTTTTAAAAAATGGCAAAAAAATCTTAGGTTTAAACCCTGGAGCA
AGCTTTGGAAGCGCTAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTGA
AAAATCTTTGCAACAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGCCCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAATGGTTTTAGAAAAATTAAAATTTGATACTTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	93.248	99.045	0.924