Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   OBG92_RS10155 Genome accession   NZ_CP109657
Coordinates   2160756..2161112 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa strain Zw26     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2155756..2166112
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OBG92_RS10130 (OBG92_02001) fabF 2155968..2157212 (+) 1245 WP_012075175.1 beta-ketoacyl-ACP synthase II -
  OBG92_RS10135 (OBG92_02002) pabC 2157212..2158027 (+) 816 WP_043102434.1 aminodeoxychorismate lyase -
  OBG92_RS10140 (OBG92_02003) mltG 2158033..2159082 (+) 1050 WP_034078706.1 endolytic transglycosylase MltG -
  OBG92_RS10145 (OBG92_02004) tmk 2159111..2159743 (+) 633 WP_034078488.1 dTMP kinase -
  OBG92_RS10150 (OBG92_02005) - 2159736..2160722 (+) 987 WP_012075178.1 DNA polymerase III subunit delta' -
  OBG92_RS10155 (OBG92_02006) pilZ 2160756..2161112 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  OBG92_RS10160 (OBG92_02007) - 2161127..2161909 (+) 783 WP_003155801.1 TatD family hydrolase -
  OBG92_RS10165 (OBG92_02008) - 2162135..2163268 (-) 1134 WP_012075180.1 aminotransferase class V-fold PLP-dependent enzyme -
  OBG92_RS10170 (OBG92_02009) - 2163354..2163992 (+) 639 WP_003155803.1 TetR/AcrR family transcriptional regulator -
  OBG92_RS10175 (OBG92_02010) - 2164162..2165058 (+) 897 WP_003155806.1 radical SAM protein -
  OBG92_RS10180 (OBG92_02011) - 2165123..2165755 (+) 633 WP_256157584.1 DUF4823 domain-containing protein -

Sequence

Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=679679 OBG92_RS10155 WP_003091119.1 2160756..2161112(+) (pilZ) [Pseudomonas aeruginosa strain Zw26]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=679679 OBG92_RS10155 WP_003091119.1 2160756..2161112(+) (pilZ) [Pseudomonas aeruginosa strain Zw26]
ATGAGTTTGCCACCCAATCTCGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGCGCGGCGGGCATCGGCGTGCAGTTCAACGACGGGGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains

Predicted by InterProScan.

PilZ domain (PilZ)

(17-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449
  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449