Detailed information NTG0679674

Bioinformatically predicted

Overview

• Name: fimV
• Type: Machinery gene
• Locus tag: OBG92_RS09250
• Genome accession: NZ_CP109657
• Coordinates: 1960103..1962841 (+)
• Length: 912 a.a.
• NCBI ID: WP_256157517.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain Zw26
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1955103..1967841

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OBG92_RS09230 (OBG92_01825)	-	1955738..1956499 (+)	762	WP_043103296.1	class I SAM-dependent methyltransferase	-
OBG92_RS09235 (OBG92_01826)	leuB	1956558..1957640 (+)	1083	Protein_1826	3-isopropylmalate dehydrogenase	-
OBG92_RS09240 (OBG92_01827)	asd	1957710..1958822 (+)	1113	WP_012075055.1	aspartate-semialdehyde dehydrogenase	-
OBG92_RS09245 (OBG92_01828)	-	1958924..1959934 (+)	1011	WP_058145886.1	aspartate-semialdehyde dehydrogenase	-
OBG92_RS09250 (OBG92_01829)	fimV	1960103..1962841 (+)	2739	WP_256157517.1	motility hub landmark protein FimV	Machinery gene
OBG92_RS09255 (OBG92_01830)	truA	1962863..1963720 (+)	858	WP_053816961.1	tRNA pseudouridine(38-40) synthase TruA	-
OBG92_RS09260 (OBG92_01831)	-	1963810..1964445 (+)	636	WP_034078388.1	phosphoribosylanthranilate isomerase	-
OBG92_RS09265 (OBG92_01832)	accD	1964714..1965586 (+)	873	WP_012075059.1	acetyl-CoA carboxylase, carboxyltransferase subunit beta	-
OBG92_RS09270 (OBG92_01833)	folC	1965583..1966872 (+)	1290	WP_256157521.1	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	-
OBG92_RS09275 (OBG92_01834)	-	1966876..1967535 (+)	660	WP_043103287.1	SPOR domain-containing protein	-

Sequence

Protein

• Length: 912 a.a.
• Molecular weight: 95745.84 Da
• Isoelectric Point: 3.9231

>NTDB_id=679674 OBG92_RS09250 WP_256157517.1 1960103..1962841(+) (fimV) [Pseudomonas aeruginosa strain Zw26]
MVRLRTLVRAIAAASVLTSGMAHGLGLGEITLKSALNQPLDAEIELLEVRDLSSGEVIPSLASPEEFSKAGVDRLYYLTD
LKFTPVVKPNGKSVIRVTSSKPVQEPYLNFLVQVLWPNGRLLREYTVLLDPPLYSPQAAASAPQAPVSAPRASSAPRAPQ
APAPVRTTAPAGSETYRIVSNDTLWEIAQRNRTDRVSVPQAMLAFQELNPGAFVDGNINRLKSGQVLRIPTEQQMLERSP
REALSQVQAQNQSWRGSRNPAAASAGARQLDATQRSAAGSAPAKVDAPDNLRLVSGEGKASKGADKGGKGDSKAIADTLA
VTKESLDSTRRENEELQSRMQDLQSQLDKLQKLIQLKDAQLAKLQGQLAAEGQGVAQPGAAQVDAGAAAQAPAAAAPTPA
PAGEAPAAPAQPPVAPPPAPAAETPPAPAAPAPVQTEEPAEASFLDELLANPLWLAVIGGSALLALLVLLMILSRRNAQK
EKDEAAALAAEAGEEQEDALDLGKDGFDDLTLDEPEPQVAAVAASTEKTTAQTSDALGEADIYIAYGRFNQAAELLQNAI
YDEPQRSDLRLKLMEVYAEMGDREGFARQENELREIGGAQPQVEQLKSRYPAMVAVAAVAGLAGAKLAQDELDSFSLDDL
SLDHTGHAAGPDAAGQDLDDAFDLSLDDLDGDLGGDEVQADLKSDSGALDDLTLDSDLDLAASAPVEKPADDLDFGLDFA
DLAETPVDAKGDGLGDFSLDLDAPEDKLSDDDFLLSLNDDAAAAAPADNGFGLDTEAADEPSLSLPDDFDLSLADEPAEP
AVPAKSEDSFAAQLDEVSAQLDELASNLDEPKNAAPSFSAEDAAIASTLDGESDDDFDFLSGADEAATKLDLARAYIDMG
DSEGARDILEEVLAEGNDSQQAEARELLERLA

Nucleotide

• Length: 2739 bp

>NTDB_id=679674 OBG92_RS09250 WP_256157517.1 1960103..1962841(+) (fimV) [Pseudomonas aeruginosa strain Zw26]
ATGGTTCGGCTTCGTACACTGGTTCGGGCAATCGCGGCGGCCTCGGTCCTGACTTCCGGCATGGCGCACGGGTTGGGACT
CGGCGAAATAACCCTGAAGTCGGCGTTGAACCAGCCGCTGGATGCCGAGATCGAGCTGCTCGAAGTCCGCGACCTGAGTT
CGGGCGAGGTGATCCCGAGCCTGGCGTCGCCGGAGGAATTCAGCAAGGCGGGCGTCGATCGCCTGTACTACCTTACCGAC
CTGAAGTTCACCCCGGTGGTGAAGCCCAACGGCAAGAGCGTCATCCGCGTGACCTCGTCGAAGCCGGTGCAGGAACCCTA
CCTGAACTTCCTCGTCCAGGTCCTCTGGCCGAACGGCCGCCTGCTGCGCGAATACACCGTCCTGCTGGATCCGCCGCTGT
ACTCGCCGCAGGCCGCGGCGAGCGCCCCGCAGGCACCGGTCAGCGCGCCGCGGGCGAGCAGCGCTCCACGTGCCCCGCAG
GCGCCGGCGCCGGTGCGGACCACCGCGCCGGCCGGCAGCGAGACCTATCGCATCGTGTCCAACGACACGCTGTGGGAGAT
CGCCCAGCGCAACCGTACCGACCGGGTTTCCGTGCCGCAGGCGATGCTCGCCTTCCAGGAACTGAATCCGGGCGCCTTCG
TCGATGGCAACATCAACCGGCTGAAGAGCGGCCAGGTCCTGCGCATCCCCACCGAACAACAGATGCTGGAGCGCTCCCCG
CGCGAGGCGCTGTCCCAGGTGCAGGCGCAGAACCAGAGCTGGCGCGGCAGCCGCAATCCGGCCGCGGCCAGCGCCGGCGC
CCGGCAATTGGACGCGACCCAGCGCAGCGCCGCCGGTTCGGCGCCGGCCAAGGTCGACGCCCCGGACAACCTGCGCCTGG
TTTCCGGCGAAGGCAAGGCCAGCAAGGGGGCCGACAAGGGCGGCAAGGGTGACAGCAAGGCGATCGCCGACACCCTGGCG
GTGACCAAGGAAAGCCTGGACAGCACCCGTCGCGAGAACGAAGAACTGCAGAGCCGCATGCAGGACCTGCAGAGCCAACT
GGACAAGCTGCAGAAACTGATCCAGCTGAAAGACGCCCAGTTGGCCAAGCTGCAGGGGCAATTGGCTGCCGAAGGCCAGG
GCGTAGCCCAGCCGGGTGCGGCCCAGGTGGATGCCGGCGCCGCTGCGCAAGCTCCCGCCGCCGCAGCGCCGACCCCGGCT
CCCGCCGGCGAGGCGCCAGCCGCTCCGGCGCAGCCTCCGGTAGCGCCGCCGCCCGCGCCAGCGGCCGAGACCCCGCCGGC
ACCAGCCGCACCGGCCCCGGTACAGACGGAAGAACCGGCGGAAGCGAGTTTCCTCGACGAGTTGCTGGCCAATCCGCTGT
GGCTGGCGGTGATCGGCGGTAGCGCGCTGCTGGCCTTGCTGGTCCTGCTGATGATTCTGTCCCGGCGCAATGCGCAGAAG
GAGAAGGACGAGGCTGCGGCCCTGGCGGCGGAAGCCGGCGAGGAACAGGAGGATGCGCTGGACCTGGGAAAGGACGGCTT
CGACGACCTGACCCTCGACGAGCCTGAGCCGCAGGTCGCGGCCGTTGCGGCGTCGACCGAGAAGACCACCGCGCAGACTT
CCGATGCGCTGGGCGAGGCCGATATCTACATCGCCTACGGACGCTTCAACCAGGCCGCCGAACTGCTGCAGAACGCCATT
TATGACGAGCCGCAGCGCAGCGACCTGCGCCTCAAGCTGATGGAAGTCTATGCCGAGATGGGCGATCGCGAAGGCTTCGC
CCGCCAGGAAAACGAACTGCGCGAGATCGGTGGCGCCCAGCCGCAGGTCGAGCAGCTCAAGTCGCGCTACCCGGCGATGG
TGGCGGTGGCCGCGGTTGCCGGCCTGGCCGGCGCCAAGCTGGCGCAGGACGAACTGGACAGCTTCAGCCTCGACGACCTG
TCGCTGGACCACACCGGTCATGCGGCCGGGCCGGACGCGGCCGGGCAGGACCTCGACGACGCCTTCGACCTGAGCCTGGA
TGACCTCGATGGCGATCTCGGCGGTGACGAGGTGCAGGCCGACCTCAAGTCCGATAGCGGTGCGCTGGACGACCTGACCC
TGGACAGCGATCTCGACCTGGCTGCCTCGGCGCCGGTGGAGAAGCCGGCCGATGACCTCGATTTCGGCCTGGACTTCGCC
GACCTGGCGGAGACCCCGGTCGACGCCAAGGGCGACGGCCTGGGTGATTTCTCCCTGGACCTCGATGCGCCGGAAGACAA
GCTGTCGGATGACGATTTCCTGCTCTCGCTGAATGACGACGCGGCCGCCGCGGCGCCCGCCGACAACGGGTTCGGCCTCG
ACACCGAGGCCGCCGACGAGCCGTCGTTGTCCCTGCCGGACGACTTCGACCTGTCGCTGGCCGACGAACCGGCGGAACCG
GCCGTCCCGGCGAAGAGCGAAGACAGTTTTGCCGCCCAGTTGGACGAGGTGAGTGCGCAGTTGGACGAATTGGCCAGCAA
TCTTGACGAGCCGAAGAATGCGGCGCCGAGCTTCTCGGCCGAGGATGCGGCGATCGCCTCGACCCTGGATGGGGAATCCG
ACGACGACTTCGATTTCCTTTCCGGCGCCGATGAAGCGGCGACCAAGCTGGATCTGGCGCGTGCCTATATCGACATGGGT
GACAGCGAGGGCGCGCGCGATATCCTCGAGGAAGTCCTGGCCGAAGGCAACGACAGCCAGCAGGCGGAAGCCCGCGAGTT
GCTGGAGCGCCTGGCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (176-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
fimV	Pseudomonas aeruginosa PAK	96.364	42.215	0.407